Cluster: C37.CMAG_2_CGC27
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: C37.CMAG_2
- CGC Family ID: CGCFAM_07977
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C37_contig_4097 | C37_contig_4097_1791 | 1956194 | 1957342 | + | 2.A.86.1.3 |
| pfam | C37_contig_4097 | C37_contig_4097_1792 | 1957728 | 1959686 | - | fn3 |
| CAZyme | C37_contig_4097 | C37_contig_4097_1793 | 1959841 | 1960632 | + | GH25 |
| CAZyme | C37_contig_4097 | C37_contig_4097_1794 | 1960648 | 1962444 | + | GH25 |
| STP | C37_contig_4097 | C37_contig_4097_1795 | 1962459 | 1963529 | + | Aminotran_1_2 |
| NULL(UNKNOWN) | C37_contig_4097 | C37_contig_4097_1796 | 1963516 | 1963956 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C37_contig_4097 | C37_contig_4097_1797 | 1964311 | 1965147 | - | 3.A.1.103.6 |
| STP | C37_contig_4097 | C37_contig_4097_1798 | 1965230 | 1965724 | - | SKI |
| pfam | C37_contig_4097 | C37_contig_4097_1799 | 1965721 | 1966551 | - | Shikimate_dh_N |
| TC | C37_contig_4097 | C37_contig_4097_1800 | 1966672 | 1966899 | + | 3.D.1.6.4 |
Gene ID: C37_contig_4097_1791
Type: TC
Location: 1956194 - 1957342 (+)
Type: TC
Location: 1956194 - 1957342 (+)
Gene ID: C37_contig_4097_1792
Type: pfam
Location: 1957728 - 1959686 (-)
Type: pfam
Location: 1957728 - 1959686 (-)
Gene ID: C37_contig_4097_1793
Type: CAZyme
Location: 1959841 - 1960632 (+)
Type: CAZyme
Location: 1959841 - 1960632 (+)
Gene ID: C37_contig_4097_1794
Type: CAZyme
Location: 1960648 - 1962444 (+)
Type: CAZyme
Location: 1960648 - 1962444 (+)
Gene ID: C37_contig_4097_1795
Type: STP
Location: 1962459 - 1963529 (+)
Type: STP
Location: 1962459 - 1963529 (+)
Gene ID: C37_contig_4097_1796
Type:
Location: 1963516 - 1963956 (+)
Type:
Location: 1963516 - 1963956 (+)
Gene ID: C37_contig_4097_1797
Type: TC
Location: 1964311 - 1965147 (-)
Type: TC
Location: 1964311 - 1965147 (-)
Gene ID: C37_contig_4097_1798
Type: STP
Location: 1965230 - 1965724 (-)
Type: STP
Location: 1965230 - 1965724 (-)
Gene ID: C37_contig_4097_1799
Type: pfam
Location: 1965721 - 1966551 (-)
Type: pfam
Location: 1965721 - 1966551 (-)
Gene ID: C37_contig_4097_1800
Type: TC
Location: 1966672 - 1966899 (+)
Type: TC
Location: 1966672 - 1966899 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp000434995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C37_contig_4097_1791 | vegan > omnivore | 1.08690 | 0.03179 |
| C37_contig_4097_1791 | vegetarian > vegan | 1.04596 | 0.00731 |
| C37_contig_4097_1791 | vegetarian > omnivore | 2.13286 | 0.00067 |
| C37_contig_4097_1792 | vegetarian > omnivore | 1.20051 | 0.00067 |
| C37_contig_4097_1792 | vegetarian > vegan | 2.38827 | 0.00731 |
| C37_contig_4097_1793 | vegetarian > vegan | 1.34433 | 0.00731 |
| C37_contig_4097_1794 | vegetarian > vegan | 2.04155 | 0.00483 |
| C37_contig_4097_1794 | vegetarian > omnivore | 1.37481 | 0.00067 |
| C37_contig_4097_1795 | vegetarian > omnivore | 2.14875 | 0.00067 |
| C37_contig_4097_1795 | vegetarian > vegan | 1.30483 | 0.00731 |
| C37_contig_4097_1796 | vegetarian > omnivore | 2.17022 | 0.00067 |
| C37_contig_4097_1796 | vegetarian > vegan | 1.33918 | 0.00731 |
| C37_contig_4097_1797 | vegan > omnivore | 1.02547 | 0.03179 |
| C37_contig_4097_1797 | vegetarian > omnivore | 2.00716 | 0.00067 |
| C37_contig_4097_1799 | vegetarian > vegan | 1.33329 | 0.00731 |
| C37_contig_4097_1799 | vegetarian > omnivore | 2.13864 | 0.00067 |
| C37_contig_4097_1800 | vegetarian > omnivore | 1.89222 | 0.00067 |
| C37_contig_4097_1800 | vegan > omnivore | 1.40435 | 0.03179 |