Cluster: C37.CMAG_2_CGC17
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: C37.CMAG_2
- CGC Family ID: CGCFAM_00010
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C37_contig_4097 | C37_contig_4097_1021 | 1094272 | 1095675 | + | 2.A.25.1.3 |
| CAZyme | C37_contig_4097 | C37_contig_4097_1022 | 1095739 | 1098075 | - | GT35 |
| CAZyme | C37_contig_4097 | C37_contig_4097_1023 | 1098078 | 1099562 | - | GH77 |
| TC | C37_contig_4097 | C37_contig_4097_1024 | 1099576 | 1100688 | - | 3.A.1.1.26 |
| TC | C37_contig_4097 | C37_contig_4097_1025 | 1100707 | 1101546 | - | 3.A.1.1.45 |
| TC | C37_contig_4097 | C37_contig_4097_1026 | 1101546 | 1102391 | - | 3.A.1.1.45 |
| TC | C37_contig_4097 | C37_contig_4097_1027 | 1102437 | 1103834 | - | 3.A.1.1.45 |
| CAZyme | C37_contig_4097 | C37_contig_4097_1028 | 1103981 | 1106407 | + | GH3 |
Gene ID: C37_contig_4097_1021
Type: TC
Location: 1094272 - 1095675 (+)
Type: TC
Location: 1094272 - 1095675 (+)
Gene ID: C37_contig_4097_1022
Type: CAZyme
Location: 1095739 - 1098075 (-)
Type: CAZyme
Location: 1095739 - 1098075 (-)
Gene ID: C37_contig_4097_1023
Type: CAZyme
Location: 1098078 - 1099562 (-)
Type: CAZyme
Location: 1098078 - 1099562 (-)
Gene ID: C37_contig_4097_1024
Type: TC
Location: 1099576 - 1100688 (-)
Type: TC
Location: 1099576 - 1100688 (-)
Gene ID: C37_contig_4097_1025
Type: TC
Location: 1100707 - 1101546 (-)
Type: TC
Location: 1100707 - 1101546 (-)
Gene ID: C37_contig_4097_1026
Type: TC
Location: 1101546 - 1102391 (-)
Type: TC
Location: 1101546 - 1102391 (-)
Gene ID: C37_contig_4097_1027
Type: TC
Location: 1102437 - 1103834 (-)
Type: TC
Location: 1102437 - 1103834 (-)
Gene ID: C37_contig_4097_1028
Type: CAZyme
Location: 1103981 - 1106407 (+)
Type: CAZyme
Location: 1103981 - 1106407 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp000434995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C37_contig_4097_1021 | vegan > omnivore | 1.31087 | 0.03179 |
| C37_contig_4097_1021 | vegetarian > omnivore | 1.48325 | 0.00067 |
| C37_contig_4097_1025 | vegan > omnivore | 1.19445 | 0.03179 |
| C37_contig_4097_1025 | vegetarian > omnivore | 1.53592 | 0.00067 |
| C37_contig_4097_1026 | vegetarian > omnivore | 1.14652 | 0.00067 |
| C37_contig_4097_1027 | vegetarian > omnivore | 1.10122 | 0.00067 |