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Cluster: C37.CMAG_2_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C37_contig_4097 C37_contig_4097_568 610107 612602 + GH3
STP C37_contig_4097 C37_contig_4097_569 612911 613570 - AraC_binding
CAZyme C37_contig_4097 C37_contig_4097_570 613671 616337 + GH95
TC C37_contig_4097 C37_contig_4097_571 616523 617224 + 3.A.1.134.3
pfam C37_contig_4097 C37_contig_4097_572 617236 619965 + FtsX | FtsX
STP C37_contig_4097 C37_contig_4097_573 620163 620381 + HMA
TC C37_contig_4097 C37_contig_4097_574 620397 622271 + 3.A.3.6.10
Gene ID: C37_contig_4097_568
Type: CAZyme
Location: 610107 - 612602 (+)
Gene ID: C37_contig_4097_569
Type: STP
Location: 612911 - 613570 (-)
Gene ID: C37_contig_4097_570
Type: CAZyme
Location: 613671 - 616337 (+)
Gene ID: C37_contig_4097_571
Type: TC
Location: 616523 - 617224 (+)
Gene ID: C37_contig_4097_572
Type: pfam
Location: 617236 - 619965 (+)
Gene ID: C37_contig_4097_573
Type: STP
Location: 620163 - 620381 (+)
Gene ID: C37_contig_4097_574
Type: TC
Location: 620397 - 622271 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C37_contig_4097_569 vegan > omnivore 1.17828 0.03179

🧭 Explore Read Mapping of CGC

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