Cluster: C37.CMAG_2_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: C37.CMAG_2
- CGC Family ID: CGCFAM_00611
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C37_contig_4097 | C37_contig_4097_20 | 20302 | 21510 | + | 3.B.1.1.2 |
| pfam | C37_contig_4097 | C37_contig_4097_21 | 21589 | 23826 | + | UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor |
| NULL(UNKNOWN) | C37_contig_4097 | C37_contig_4097_22 | 23876 | 24067 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C37_contig_4097 | C37_contig_4097_23 | 24336 | 25673 | + | CE4 |
| TC | C37_contig_4097 | C37_contig_4097_24 | 25721 | 26443 | - | 3.A.1.3.25 |
| TC | C37_contig_4097 | C37_contig_4097_25 | 26430 | 27134 | - | 3.A.1.3.15 |
| TC | C37_contig_4097 | C37_contig_4097_26 | 27194 | 28087 | - | 3.A.1.3.2 |
Gene ID: C37_contig_4097_20
Type: TC
Location: 20302 - 21510 (+)
Type: TC
Location: 20302 - 21510 (+)
Gene ID: C37_contig_4097_21
Type: pfam
Location: 21589 - 23826 (+)
Type: pfam
Location: 21589 - 23826 (+)
Gene ID: C37_contig_4097_22
Type:
Location: 23876 - 24067 (-)
Type:
Location: 23876 - 24067 (-)
Gene ID: C37_contig_4097_23
Type: CAZyme
Location: 24336 - 25673 (+)
Type: CAZyme
Location: 24336 - 25673 (+)
Gene ID: C37_contig_4097_24
Type: TC
Location: 25721 - 26443 (-)
Type: TC
Location: 25721 - 26443 (-)
Gene ID: C37_contig_4097_25
Type: TC
Location: 26430 - 27134 (-)
Type: TC
Location: 26430 - 27134 (-)
Gene ID: C37_contig_4097_26
Type: TC
Location: 27194 - 28087 (-)
Type: TC
Location: 27194 - 28087 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp000434995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C37_contig_4097_20 | vegan > omnivore | 1.27269 | 0.03179 |
| C37_contig_4097_20 | vegetarian > omnivore | 1.15962 | 0.00067 |
| C37_contig_4097_21 | vegetarian > omnivore | 1.51120 | 0.00067 |
| C37_contig_4097_23 | vegetarian > vegan | 1.13823 | 0.00731 |
| C37_contig_4097_24 | vegan > omnivore | 1.10263 | 0.03179 |
| C37_contig_4097_24 | vegetarian > omnivore | 1.37524 | 0.00067 |
| C37_contig_4097_25 | vegan > omnivore | 2.08626 | 0.03179 |
| C37_contig_4097_25 | vegetarian > omnivore | 2.33041 | 0.00067 |
| C37_contig_4097_26 | vegan > omnivore | 1.83801 | 0.03179 |
| C37_contig_4097_26 | vegetarian > omnivore | 2.14596 | 0.00067 |