Cluster: C37.CMAG_1_CGC7
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: C37.CMAG_1
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C37_contig_1538 | C37_contig_1538_731 | 863935 | 866034 | - | 1.B.52.2.1 |
| pfam | C37_contig_1538 | C37_contig_1538_732 | 866682 | 867728 | - | DUF4434 |
| STP | C37_contig_1538 | C37_contig_1538_733 | 867740 | 870703 | - | TPR_2 |
| CAZyme | C37_contig_1538 | C37_contig_1538_734 | 870891 | 872555 | - | GT2 |
| CAZyme | C37_contig_1538 | C37_contig_1538_735 | 872613 | 873221 | - | GT2 |
| pfam | C37_contig_1538 | C37_contig_1538_736 | 873221 | 874399 | - | Epimerase_2 |
| TC | C37_contig_1538 | C37_contig_1538_737 | 874907 | 876670 | + | 3.A.18.1.1 |
| sulfatase | C37_contig_1538 | C37_contig_1538_738 | 877247 | 878728 | + | S1_6 |
| pfam | C37_contig_1538 | C37_contig_1538_739 | 878878 | 879495 | - | Nitroreductase |
| TC | C37_contig_1538 | C37_contig_1538_740 | 879560 | 882301 | - | 3.A.3.4.1 |
| TC | C37_contig_1538 | C37_contig_1538_741 | 882812 | 885388 | - | 3.A.5.1.1 |
Gene ID: C37_contig_1538_731
Type: TC
Location: 863935 - 866034 (-)
Type: TC
Location: 863935 - 866034 (-)
Gene ID: C37_contig_1538_732
Type: pfam
Location: 866682 - 867728 (-)
Type: pfam
Location: 866682 - 867728 (-)
Gene ID: C37_contig_1538_733
Type: STP
Location: 867740 - 870703 (-)
Type: STP
Location: 867740 - 870703 (-)
Gene ID: C37_contig_1538_734
Type: CAZyme
Location: 870891 - 872555 (-)
Type: CAZyme
Location: 870891 - 872555 (-)
Gene ID: C37_contig_1538_735
Type: CAZyme
Location: 872613 - 873221 (-)
Type: CAZyme
Location: 872613 - 873221 (-)
Gene ID: C37_contig_1538_736
Type: pfam
Location: 873221 - 874399 (-)
Type: pfam
Location: 873221 - 874399 (-)
Gene ID: C37_contig_1538_737
Type: TC
Location: 874907 - 876670 (+)
Type: TC
Location: 874907 - 876670 (+)
Gene ID: C37_contig_1538_738
Type: sulfatase
Location: 877247 - 878728 (+)
Type: sulfatase
Location: 877247 - 878728 (+)
Gene ID: C37_contig_1538_739
Type: pfam
Location: 878878 - 879495 (-)
Type: pfam
Location: 878878 - 879495 (-)
Gene ID: C37_contig_1538_740
Type: TC
Location: 879560 - 882301 (-)
Type: TC
Location: 879560 - 882301 (-)
Gene ID: C37_contig_1538_741
Type: TC
Location: 882812 - 885388 (-)
Type: TC
Location: 882812 - 885388 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio legallii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.