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Cluster: C37.CMAG_1_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C37_contig_1538 C37_contig_1538_709 834797 835507 - 3.A.1.4.10
TC C37_contig_1538 C37_contig_1538_710 835510 836280 - 3.A.1.4.10
TC C37_contig_1538 C37_contig_1538_711 836277 837263 - 3.A.1.4.8
TC C37_contig_1538 C37_contig_1538_712 837260 838165 - 3.A.1.4.1
TC C37_contig_1538 C37_contig_1538_713 838310 839431 - 3.A.1.4.8
CAZyme C37_contig_1538 C37_contig_1538_714 839891 842095 + GH133
CAZyme C37_contig_1538 C37_contig_1538_715 842106 843431 + GT4
CAZyme C37_contig_1538 C37_contig_1538_716 843431 844735 + GH57
CAZyme C37_contig_1538 C37_contig_1538_717 844813 849069 + GT3 | GT35
TF C37_contig_1538 C37_contig_1538_718 849332 850129 - GntR
TF C37_contig_1538 C37_contig_1538_719 850435 851814 - HTH_8
TC C37_contig_1538 C37_contig_1538_720 851814 853313 - 2.A.21.9.1
Gene ID: C37_contig_1538_709
Type: TC
Location: 834797 - 835507 (-)
Gene ID: C37_contig_1538_710
Type: TC
Location: 835510 - 836280 (-)
Gene ID: C37_contig_1538_711
Type: TC
Location: 836277 - 837263 (-)
Gene ID: C37_contig_1538_712
Type: TC
Location: 837260 - 838165 (-)
Gene ID: C37_contig_1538_713
Type: TC
Location: 838310 - 839431 (-)
Gene ID: C37_contig_1538_714
Type: CAZyme
Location: 839891 - 842095 (+)
Gene ID: C37_contig_1538_715
Type: CAZyme
Location: 842106 - 843431 (+)
Gene ID: C37_contig_1538_716
Type: CAZyme
Location: 843431 - 844735 (+)
Gene ID: C37_contig_1538_717
Type: CAZyme
Location: 844813 - 849069 (+)
Gene ID: C37_contig_1538_718
Type: TF
Location: 849332 - 850129 (-)
Gene ID: C37_contig_1538_719
Type: TF
Location: 850435 - 851814 (-)
Gene ID: C37_contig_1538_720
Type: TC
Location: 851814 - 853313 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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