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Cluster: C37.CMAG_1_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C37_contig_1538 C37_contig_1538_201 253590 254609 - GH18
NULL(UNKNOWN) C37_contig_1538 C37_contig_1538_202 254682 259550 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) C37_contig_1538 C37_contig_1538_203 259550 261526 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C37_contig_1538 C37_contig_1538_204 261531 263339 - GT2
pfam C37_contig_1538 C37_contig_1538_205 263653 264888 - DDE_Tnp_ISL3 | HTH_Tnp_ISL3 | Zn_ribbon_ISL3
TC C37_contig_1538 C37_contig_1538_206 265292 267166 + 3.A.1.120.6
TC C37_contig_1538 C37_contig_1538_207 267514 268503 + 3.A.1.20.1
TC C37_contig_1538 C37_contig_1538_208 268661 269716 + 3.A.1.20.1
TC C37_contig_1538 C37_contig_1538_209 269803 271494 + 3.A.1.20.4
TC C37_contig_1538 C37_contig_1538_210 271497 272561 + 3.A.1.1.16
Gene ID: C37_contig_1538_201
Type: CAZyme
Location: 253590 - 254609 (-)
Gene ID: C37_contig_1538_202
Type:
Location: 254682 - 259550 (-)
Gene ID: C37_contig_1538_203
Type:
Location: 259550 - 261526 (-)
Gene ID: C37_contig_1538_204
Type: CAZyme
Location: 261531 - 263339 (-)
Gene ID: C37_contig_1538_205
Type: pfam
Location: 263653 - 264888 (-)
Gene ID: C37_contig_1538_206
Type: TC
Location: 265292 - 267166 (+)
Gene ID: C37_contig_1538_207
Type: TC
Location: 267514 - 268503 (+)
Gene ID: C37_contig_1538_208
Type: TC
Location: 268661 - 269716 (+)
Gene ID: C37_contig_1538_209
Type: TC
Location: 269803 - 271494 (+)
Gene ID: C37_contig_1538_210
Type: TC
Location: 271497 - 272561 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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