Cluster: C34.bin_4_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C34.bin_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C34_scaffold_1244 | C34_scaffold_1244_248 | 266664 | 267998 | - | 2.A.22.5.3 |
| TF | C34_scaffold_1244 | C34_scaffold_1244_249 | 268194 | 269081 | + | HTH_1 |
| pfam | C34_scaffold_1244 | C34_scaffold_1244_250 | 269125 | 270078 | - | A_deaminase |
| TC | C34_scaffold_1244 | C34_scaffold_1244_251 | 270591 | 271979 | + | 2.A.66.1.21 |
| CAZyme | C34_scaffold_1244 | C34_scaffold_1244_252 | 272133 | 274139 | - | GH42 |
Gene ID: C34_scaffold_1244_248
Type: TC
Location: 266664 - 267998 (-)
Type: TC
Location: 266664 - 267998 (-)
Gene ID: C34_scaffold_1244_249
Type: TF
Location: 268194 - 269081 (+)
Type: TF
Location: 268194 - 269081 (+)
Gene ID: C34_scaffold_1244_250
Type: pfam
Location: 269125 - 270078 (-)
Type: pfam
Location: 269125 - 270078 (-)
Gene ID: C34_scaffold_1244_251
Type: TC
Location: 270591 - 271979 (+)
Type: TC
Location: 270591 - 271979 (+)
Gene ID: C34_scaffold_1244_252
Type: CAZyme
Location: 272133 - 274139 (-)
Type: CAZyme
Location: 272133 - 274139 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C34_scaffold_1244_250 | vegetarian > omnivore | 1.19380 | 0.01372 |