Cluster: C34.bin_4_CGC46
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C34.bin_4
- CGC Family ID: CGCFAM_03346
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C34_contig_1470 | C34_contig_1470_11 | 10165 | 11712 | + | GH13_44 |
| TF | C34_contig_1470 | C34_contig_1470_12 | 12268 | 13143 | - | HTH_AraC | HTH_AraC |
| TC | C34_contig_1470 | C34_contig_1470_13 | 13147 | 14637 | - | 2.A.66.1.33 |
Gene ID: C34_contig_1470_11
Type: CAZyme
Location: 10165 - 11712 (+)
Type: CAZyme
Location: 10165 - 11712 (+)
Gene ID: C34_contig_1470_12
Type: TF
Location: 12268 - 13143 (-)
Type: TF
Location: 12268 - 13143 (-)
Gene ID: C34_contig_1470_13
Type: TC
Location: 13147 - 14637 (-)
Type: TC
Location: 13147 - 14637 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C34_contig_1470_12 | vegetarian > omnivore | 1.79508 | 0.01372 |