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Cluster: C34.bin_4_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C34_scaffold_1244 C34_scaffold_1244_209 229414 230157 - 3.A.1.3.25
TC C34_scaffold_1244 C34_scaffold_1244_210 230144 230815 - 3.A.1.3.25
TC C34_scaffold_1244 C34_scaffold_1244_211 230889 231734 - 3.A.1.3.25
TF C34_scaffold_1244 C34_scaffold_1244_212 232045 232530 - MerR
STP C34_scaffold_1244 C34_scaffold_1244_213 232846 233970 + Fer4 | Fer4
TC C34_scaffold_1244 C34_scaffold_1244_214 234229 235605 + 2.A.22.5.3
CAZyme C34_scaffold_1244 C34_scaffold_1244_215 236117 237856 + GT5
pfam C34_scaffold_1244 C34_scaffold_1244_216 237949 238680 - ABC2_membrane | ABC2_membrane_3
TC C34_scaffold_1244 C34_scaffold_1244_217 238693 239535 - 3.A.1.105.17
Gene ID: C34_scaffold_1244_209
Type: TC
Location: 229414 - 230157 (-)
Gene ID: C34_scaffold_1244_210
Type: TC
Location: 230144 - 230815 (-)
Gene ID: C34_scaffold_1244_211
Type: TC
Location: 230889 - 231734 (-)
Gene ID: C34_scaffold_1244_212
Type: TF
Location: 232045 - 232530 (-)
Gene ID: C34_scaffold_1244_213
Type: STP
Location: 232846 - 233970 (+)
Gene ID: C34_scaffold_1244_214
Type: TC
Location: 234229 - 235605 (+)
Gene ID: C34_scaffold_1244_215
Type: CAZyme
Location: 236117 - 237856 (+)
Gene ID: C34_scaffold_1244_216
Type: pfam
Location: 237949 - 238680 (-)
Gene ID: C34_scaffold_1244_217
Type: TC
Location: 238693 - 239535 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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