Cluster: C34.bin_4_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C34.bin_4
- CGC Family ID: CGCFAM_00477
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C34_contig_2004 | C34_contig_2004_560 | 693939 | 696350 | + | GH3 |
| TC | C34_contig_2004 | C34_contig_2004_561 | 696347 | 697714 | + | 2.A.66.1.33 |
| pfam | C34_contig_2004 | C34_contig_2004_562 | 698224 | 699909 | + | FTHFS |
| TC | C34_contig_2004 | C34_contig_2004_563 | 700059 | 700838 | + | 1.A.16.3.3 |
Gene ID: C34_contig_2004_560
Type: CAZyme
Location: 693939 - 696350 (+)
Type: CAZyme
Location: 693939 - 696350 (+)
Gene ID: C34_contig_2004_561
Type: TC
Location: 696347 - 697714 (+)
Type: TC
Location: 696347 - 697714 (+)
Gene ID: C34_contig_2004_562
Type: pfam
Location: 698224 - 699909 (+)
Type: pfam
Location: 698224 - 699909 (+)
Gene ID: C34_contig_2004_563
Type: TC
Location: 700059 - 700838 (+)
Type: TC
Location: 700059 - 700838 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C34_contig_2004_563 | vegetarian > vegan | 1.17685 | 0.00450 |