Cluster: C34.bin_4_CGC32
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C34.bin_4
- CGC Family ID: CGCFAM_00021
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C34_contig_2004 | C34_contig_2004_313 | 395170 | 396108 | + | 3.A.1.1.10 |
| TC | C34_contig_2004 | C34_contig_2004_314 | 396122 | 397024 | + | 3.A.1.1.29 |
| CAZyme | C34_contig_2004 | C34_contig_2004_315 | 397104 | 399113 | + | GH31_4 |
Gene ID: C34_contig_2004_313
Type: TC
Location: 395170 - 396108 (+)
Type: TC
Location: 395170 - 396108 (+)
Gene ID: C34_contig_2004_314
Type: TC
Location: 396122 - 397024 (+)
Type: TC
Location: 396122 - 397024 (+)
Gene ID: C34_contig_2004_315
Type: CAZyme
Location: 397104 - 399113 (+)
Type: CAZyme
Location: 397104 - 399113 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C34_contig_2004_313 | vegetarian > omnivore | 1.74441 | 0.01372 |