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Cluster: C34.bin_4_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C34_contig_2004 C34_contig_2004_211 273493 274374 + 3.A.1.1.7
TC C34_contig_2004 C34_contig_2004_212 274388 275239 + 3.A.1.1.34
CAZyme C34_contig_2004 C34_contig_2004_213 275244 276326 + GH179
pfam C34_contig_2004 C34_contig_2004_214 276986 277789 + PCMT | Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
STP C34_contig_2004 C34_contig_2004_215 277882 278967 + Peripla_BP_2
TC C34_contig_2004 C34_contig_2004_216 278971 280041 + 3.A.1.14.19
TC C34_contig_2004 C34_contig_2004_217 280042 280794 + 3.A.1.14.4
Gene ID: C34_contig_2004_211
Type: TC
Location: 273493 - 274374 (+)
Gene ID: C34_contig_2004_212
Type: TC
Location: 274388 - 275239 (+)
Gene ID: C34_contig_2004_213
Type: CAZyme
Location: 275244 - 276326 (+)
Gene ID: C34_contig_2004_214
Type: pfam
Location: 276986 - 277789 (+)
Gene ID: C34_contig_2004_215
Type: STP
Location: 277882 - 278967 (+)
Gene ID: C34_contig_2004_216
Type: TC
Location: 278971 - 280041 (+)
Gene ID: C34_contig_2004_217
Type: TC
Location: 280042 - 280794 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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