dbCAN HGM

Cluster: C34.bin_4_CGC27

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	C34_contig_2004	C34_contig_2004_146	189877	190770	+	3.A.1.1.28
TC	C34_contig_2004	C34_contig_2004_147	190775	191638	+	3.A.1.1.45
TF	C34_contig_2004	C34_contig_2004_148	191951	192802	+	HTH_AraC
CAZyme	C34_contig_2004	C34_contig_2004_149	193132	195453	+	GH31_3
CAZyme	C34_contig_2004	C34_contig_2004_150	195894	197006	+	CE2
TC	C34_contig_2004	C34_contig_2004_151	197349	199145	+	3.A.1.5.16
TC	C34_contig_2004	C34_contig_2004_152	199349	200353	+	3.A.1.5.16
TC	C34_contig_2004	C34_contig_2004_153	200369	201616	+	3.A.1.5.6
TC	C34_contig_2004	C34_contig_2004_154	201629	202636	+	3.A.1.5.14
TC	C34_contig_2004	C34_contig_2004_155	202629	203441	+	3.A.1.5.16
CAZyme	C34_contig_2004	C34_contig_2004_156	203640	205910	-	GH3
CAZyme	C34_contig_2004	C34_contig_2004_157	206337	208847	+	GH2

Gene ID: C34_contig_2004_146
Type: TC
Location: 189877 - 190770 (+)

Gene ID: C34_contig_2004_147
Type: TC
Location: 190775 - 191638 (+)

Gene ID: C34_contig_2004_148
Type: TF
Location: 191951 - 192802 (+)

Gene ID: C34_contig_2004_149
Type: CAZyme
Location: 193132 - 195453 (+)

Gene ID: C34_contig_2004_150
Type: CAZyme
Location: 195894 - 197006 (+)

Gene ID: C34_contig_2004_151
Type: TC
Location: 197349 - 199145 (+)

Gene ID: C34_contig_2004_152
Type: TC
Location: 199349 - 200353 (+)

Gene ID: C34_contig_2004_153
Type: TC
Location: 200369 - 201616 (+)

Gene ID: C34_contig_2004_154
Type: TC
Location: 201629 - 202636 (+)

Gene ID: C34_contig_2004_155
Type: TC
Location: 202629 - 203441 (+)

Gene ID: C34_contig_2004_156
Type: CAZyme
Location: 203640 - 205910 (-)

Gene ID: C34_contig_2004_157
Type: CAZyme
Location: 206337 - 208847 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
C34_contig_2004_148	vegetarian > omnivore	1.58269	0.01372
C34_contig_2004_148	vegetarian > vegan	1.55521	0.00450
C34_contig_2004_150	vegetarian > omnivore	1.32468	0.01372
C34_contig_2004_151	vegetarian > omnivore	1.07290	0.01372
C34_contig_2004_152	vegetarian > omnivore	1.18597	0.01372
C34_contig_2004_156	vegan > omnivore	1.38083	0.03340

Gene ID	Condition Pair	log2FC	FDR P-value
C34_contig_2004_150	omnivore > flexitarian	1.45115	0.01048
C34_contig_2004_150	vegan > flexitarian	1.95010	0.00364
C34_contig_2004_151	omnivore > flexitarian	2.08777	0.01048
C34_contig_2004_151	vegan > flexitarian	2.06594	0.00364
C34_contig_2004_152	omnivore > flexitarian	1.76136	0.01048
C34_contig_2004_152	vegan > flexitarian	1.50602	0.00364