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Cluster: C34.bin_4_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C34_contig_2004 C34_contig_2004_69 94109 95053 + 3.A.1.5.3
TC C34_contig_2004 C34_contig_2004_70 95050 95889 + 3.A.1.5.15
TC C34_contig_2004 C34_contig_2004_71 96241 97776 + 3.A.1.5.22
TC C34_contig_2004 C34_contig_2004_72 97786 98580 + 3.A.1.5.22
TC C34_contig_2004 C34_contig_2004_73 98570 99547 + 3.A.1.5.20
NULL(UNKNOWN) C34_contig_2004 C34_contig_2004_74 99787 100164 + NULL(UNKNOWN)
[View Structural Homologs]
TC C34_contig_2004 C34_contig_2004_75 101135 102085 + 2.A.28.2.4
TF C34_contig_2004 C34_contig_2004_76 102581 103672 - LacI
CAZyme C34_contig_2004 C34_contig_2004_77 104191 105657 + GH32
STP C34_contig_2004 C34_contig_2004_78 105772 107055 + SBP_bac_1
NULL(UNKNOWN) C34_contig_2004 C34_contig_2004_79 107104 107211 + NULL(UNKNOWN)
[View Structural Homologs]
TC C34_contig_2004 C34_contig_2004_80 107244 108149 + 3.A.1.1.32
TC C34_contig_2004 C34_contig_2004_81 108146 108973 + 3.A.1.1.24
CAZyme C34_contig_2004 C34_contig_2004_82 109247 111439 + GH36
Gene ID: C34_contig_2004_69
Type: TC
Location: 94109 - 95053 (+)
Gene ID: C34_contig_2004_70
Type: TC
Location: 95050 - 95889 (+)
Gene ID: C34_contig_2004_71
Type: TC
Location: 96241 - 97776 (+)
Gene ID: C34_contig_2004_72
Type: TC
Location: 97786 - 98580 (+)
Gene ID: C34_contig_2004_73
Type: TC
Location: 98570 - 99547 (+)
Gene ID: C34_contig_2004_74
Type:
Location: 99787 - 100164 (+)
Gene ID: C34_contig_2004_75
Type: TC
Location: 101135 - 102085 (+)
Gene ID: C34_contig_2004_76
Type: TF
Location: 102581 - 103672 (-)
Gene ID: C34_contig_2004_77
Type: CAZyme
Location: 104191 - 105657 (+)
Gene ID: C34_contig_2004_78
Type: STP
Location: 105772 - 107055 (+)
Gene ID: C34_contig_2004_79
Type:
Location: 107104 - 107211 (+)
Gene ID: C34_contig_2004_80
Type: TC
Location: 107244 - 108149 (+)
Gene ID: C34_contig_2004_81
Type: TC
Location: 108146 - 108973 (+)
Gene ID: C34_contig_2004_82
Type: CAZyme
Location: 109247 - 111439 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C34_contig_2004_69 vegetarian > omnivore 1.21663 0.01372
C34_contig_2004_70 vegetarian > omnivore 1.00233 0.01372
C34_contig_2004_72 vegetarian > omnivore 1.30332 0.01372
C34_contig_2004_74 vegetarian > omnivore 1.16827 0.01372

🧭 Explore Read Mapping of CGC

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