Cluster: C34.bin_4_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: C34.bin_4
- CGC Family ID: CGCFAM_05227
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C34_contig_1450 | C34_contig_1450_575 | 646318 | 647907 | + | GH35 |
| TC | C34_contig_1450 | C34_contig_1450_576 | 647922 | 648773 | + | 3.A.1.1.25 |
| TC | C34_contig_1450 | C34_contig_1450_577 | 648770 | 649609 | + | 3.A.1.1.42 |
| STP | C34_contig_1450 | C34_contig_1450_578 | 649700 | 650974 | + | SBP_bac_1 |
| CAZyme | C34_contig_1450 | C34_contig_1450_579 | 651184 | 653769 | + | GH35 |
Gene ID: C34_contig_1450_575
Type: CAZyme
Location: 646318 - 647907 (+)
Type: CAZyme
Location: 646318 - 647907 (+)
Gene ID: C34_contig_1450_576
Type: TC
Location: 647922 - 648773 (+)
Type: TC
Location: 647922 - 648773 (+)
Gene ID: C34_contig_1450_577
Type: TC
Location: 648770 - 649609 (+)
Type: TC
Location: 648770 - 649609 (+)
Gene ID: C34_contig_1450_578
Type: STP
Location: 649700 - 650974 (+)
Type: STP
Location: 649700 - 650974 (+)
Gene ID: C34_contig_1450_579
Type: CAZyme
Location: 651184 - 653769 (+)
Type: CAZyme
Location: 651184 - 653769 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C34_contig_1450_575 | vegetarian > omnivore | 1.30467 | 0.01372 |
| C34_contig_1450_578 | vegetarian > omnivore | 1.86768 | 0.01372 |
| C34_contig_1450_579 | vegetarian > omnivore | 1.38012 | 0.01372 |