Cluster: C34.bin_4_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: C34.bin_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C34_contig_1450 | C34_contig_1450_501 | 560059 | 560946 | + | 3.A.1.1.37 |
| TC | C34_contig_1450 | C34_contig_1450_502 | 560958 | 561815 | + | 3.A.1.1.18 |
| CAZyme | C34_contig_1450 | C34_contig_1450_503 | 561844 | 564054 | + | GH3 |
| NULL(UNKNOWN) | C34_contig_1450 | C34_contig_1450_504 | 564510 | 565307 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C34_contig_1450 | C34_contig_1450_505 | 565360 | 565755 | - | DUF3783 |
| TC | C34_contig_1450 | C34_contig_1450_506 | 565794 | 566363 | - | 2.A.51.1.6 |
| TC | C34_contig_1450 | C34_contig_1450_507 | 566373 | 566951 | - | 2.A.51.1.6 |
Gene ID: C34_contig_1450_501
Type: TC
Location: 560059 - 560946 (+)
Type: TC
Location: 560059 - 560946 (+)
Gene ID: C34_contig_1450_502
Type: TC
Location: 560958 - 561815 (+)
Type: TC
Location: 560958 - 561815 (+)
Gene ID: C34_contig_1450_503
Type: CAZyme
Location: 561844 - 564054 (+)
Type: CAZyme
Location: 561844 - 564054 (+)
Gene ID: C34_contig_1450_504
Type:
Location: 564510 - 565307 (+)
Type:
Location: 564510 - 565307 (+)
Gene ID: C34_contig_1450_505
Type: pfam
Location: 565360 - 565755 (-)
Type: pfam
Location: 565360 - 565755 (-)
Gene ID: C34_contig_1450_506
Type: TC
Location: 565794 - 566363 (-)
Type: TC
Location: 565794 - 566363 (-)
Gene ID: C34_contig_1450_507
Type: TC
Location: 566373 - 566951 (-)
Type: TC
Location: 566373 - 566951 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.