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Cluster: C34.bin_4_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C34_contig_1450 C34_contig_1450_446 492841 494334 + 2.A.50.2.1
NULL(UNKNOWN) C34_contig_1450 C34_contig_1450_447 494397 495542 + NULL(UNKNOWN)
[View Structural Homologs]
TC C34_contig_1450 C34_contig_1450_448 495906 497225 + 3.A.1.1.45
TC C34_contig_1450 C34_contig_1450_449 497430 498281 + 3.A.1.1.45
TC C34_contig_1450 C34_contig_1450_450 498283 499122 + 3.A.1.1.45
NULL(UNKNOWN) C34_contig_1450 C34_contig_1450_451 499162 499311 + NULL(UNKNOWN)
[View Structural Homologs]
TF C34_contig_1450 C34_contig_1450_452 499334 500359 + LacI
CAZyme C34_contig_1450 C34_contig_1450_453 500492 501985 + GH77
NULL(UNKNOWN) C34_contig_1450 C34_contig_1450_454 502182 502367 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C34_contig_1450 C34_contig_1450_455 502524 504194 - GH13_31
TF C34_contig_1450 C34_contig_1450_456 504213 505175 - HTH_AraC | HTH_AraC
CAZyme C34_contig_1450 C34_contig_1450_457 505172 506839 - GH13_31
STP C34_contig_1450 C34_contig_1450_458 507142 507639 - NUDIX
STP C34_contig_1450 C34_contig_1450_459 507919 508311 + Glyoxalase
TC C34_contig_1450 C34_contig_1450_460 508467 509321 + 3.A.1.26.7
TC C34_contig_1450 C34_contig_1450_461 509520 510374 + 3.A.1.26.7
TC C34_contig_1450 C34_contig_1450_462 510538 511350 + 3.A.1.25.4
Gene ID: C34_contig_1450_446
Type: TC
Location: 492841 - 494334 (+)
Gene ID: C34_contig_1450_447
Type:
Location: 494397 - 495542 (+)
Gene ID: C34_contig_1450_448
Type: TC
Location: 495906 - 497225 (+)
Gene ID: C34_contig_1450_449
Type: TC
Location: 497430 - 498281 (+)
Gene ID: C34_contig_1450_450
Type: TC
Location: 498283 - 499122 (+)
Gene ID: C34_contig_1450_451
Type:
Location: 499162 - 499311 (+)
Gene ID: C34_contig_1450_452
Type: TF
Location: 499334 - 500359 (+)
Gene ID: C34_contig_1450_453
Type: CAZyme
Location: 500492 - 501985 (+)
Gene ID: C34_contig_1450_454
Type:
Location: 502182 - 502367 (+)
Gene ID: C34_contig_1450_455
Type: CAZyme
Location: 502524 - 504194 (-)
Gene ID: C34_contig_1450_456
Type: TF
Location: 504213 - 505175 (-)
Gene ID: C34_contig_1450_457
Type: CAZyme
Location: 505172 - 506839 (-)
Gene ID: C34_contig_1450_458
Type: STP
Location: 507142 - 507639 (-)
Gene ID: C34_contig_1450_459
Type: STP
Location: 507919 - 508311 (+)
Gene ID: C34_contig_1450_460
Type: TC
Location: 508467 - 509321 (+)
Gene ID: C34_contig_1450_461
Type: TC
Location: 509520 - 510374 (+)
Gene ID: C34_contig_1450_462
Type: TC
Location: 510538 - 511350 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C34_contig_1450_446 vegetarian > vegan 1.31480 0.00450
C34_contig_1450_458 vegetarian > omnivore 2.06199 0.01372
C34_contig_1450_459 vegetarian > omnivore 1.42088 0.01372

🧭 Explore Read Mapping of CGC

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