Cluster: C34.bin_4_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C34.bin_4
- CGC Family ID: CGCFAM_02961
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C34_contig_1450 | C34_contig_1450_299 | 333768 | 334265 | + | 3.A.1.1.42 |
| TC | C34_contig_1450 | C34_contig_1450_300 | 334216 | 334578 | + | 3.A.1.1.21 |
| TC | C34_contig_1450 | C34_contig_1450_301 | 334575 | 335408 | + | 3.A.1.1.41 |
| TF | C34_contig_1450 | C34_contig_1450_302 | 335533 | 336516 | + | HTH_AraC |
| CAZyme | C34_contig_1450 | C34_contig_1450_303 | 336587 | 338626 | + | GH151 |
Gene ID: C34_contig_1450_299
Type: TC
Location: 333768 - 334265 (+)
Type: TC
Location: 333768 - 334265 (+)
Gene ID: C34_contig_1450_300
Type: TC
Location: 334216 - 334578 (+)
Type: TC
Location: 334216 - 334578 (+)
Gene ID: C34_contig_1450_301
Type: TC
Location: 334575 - 335408 (+)
Type: TC
Location: 334575 - 335408 (+)
Gene ID: C34_contig_1450_302
Type: TF
Location: 335533 - 336516 (+)
Type: TF
Location: 335533 - 336516 (+)
Gene ID: C34_contig_1450_303
Type: CAZyme
Location: 336587 - 338626 (+)
Type: CAZyme
Location: 336587 - 338626 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.