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Cluster: C34.bin_4_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C34_contig_1450 C34_contig_1450_210 238870 240327 + GT4
pfam C34_contig_1450 C34_contig_1450_211 240362 241807 + PelG
NULL(UNKNOWN) C34_contig_1450 C34_contig_1450_212 241873 242193 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C34_contig_1450 C34_contig_1450_213 242190 243452 + GT4
CAZyme C34_contig_1450 C34_contig_1450_214 243406 244191 + GT2
pfam C34_contig_1450 C34_contig_1450_215 244181 245485 + DUF4832 | DUF4874
pfam C34_contig_1450 C34_contig_1450_216 245488 246924 - DUF4832 | DUF4874
TC C34_contig_1450 C34_contig_1450_217 247015 248559 + 2.A.66.1.40
CAZyme C34_contig_1450 C34_contig_1450_218 248566 249645 + GT2
Gene ID: C34_contig_1450_210
Type: CAZyme
Location: 238870 - 240327 (+)
Gene ID: C34_contig_1450_211
Type: pfam
Location: 240362 - 241807 (+)
Gene ID: C34_contig_1450_212
Type:
Location: 241873 - 242193 (+)
Gene ID: C34_contig_1450_213
Type: CAZyme
Location: 242190 - 243452 (+)
Gene ID: C34_contig_1450_214
Type: CAZyme
Location: 243406 - 244191 (+)
Gene ID: C34_contig_1450_215
Type: pfam
Location: 244181 - 245485 (+)
Gene ID: C34_contig_1450_216
Type: pfam
Location: 245488 - 246924 (-)
Gene ID: C34_contig_1450_217
Type: TC
Location: 247015 - 248559 (+)
Gene ID: C34_contig_1450_218
Type: CAZyme
Location: 248566 - 249645 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C34_contig_1450_210 vegan > omnivore 2.06607 0.03340
C34_contig_1450_218 vegetarian > omnivore 1.47473 0.01372

🧭 Explore Read Mapping of CGC

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