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Cluster: C34.bin_4_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C34_contig_1450 C34_contig_1450_80 86164 87264 - GH5_13
TC C34_contig_1450 C34_contig_1450_81 87481 88317 - 3.A.1.1.28
TC C34_contig_1450 C34_contig_1450_82 88314 89171 - 3.A.1.1.28
TC C34_contig_1450 C34_contig_1450_83 89250 90515 - 3.A.1.1.48
TF C34_contig_1450 C34_contig_1450_84 90650 92203 - HTH_AraC | HTH_AraC
TC C34_contig_1450 C34_contig_1450_85 92172 93911 - 8.A.59.2.1
peptidase C34_contig_1450 C34_contig_1450_86 93911 94738 - S09.UPW
TC C34_contig_1450 C34_contig_1450_87 94803 95870 - 3.A.15.2.1
Gene ID: C34_contig_1450_80
Type: CAZyme
Location: 86164 - 87264 (-)
Gene ID: C34_contig_1450_81
Type: TC
Location: 87481 - 88317 (-)
Gene ID: C34_contig_1450_82
Type: TC
Location: 88314 - 89171 (-)
Gene ID: C34_contig_1450_83
Type: TC
Location: 89250 - 90515 (-)
Gene ID: C34_contig_1450_84
Type: TF
Location: 90650 - 92203 (-)
Gene ID: C34_contig_1450_85
Type: TC
Location: 92172 - 93911 (-)
Gene ID: C34_contig_1450_86
Type: peptidase
Location: 93911 - 94738 (-)
Gene ID: C34_contig_1450_87
Type: TC
Location: 94803 - 95870 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C34_contig_1450_80 vegetarian > omnivore 1.29457 0.01372
C34_contig_1450_82 vegetarian > omnivore 1.42225 0.01372
C34_contig_1450_83 vegetarian > omnivore 1.21433 0.01372

🧭 Explore Read Mapping of CGC

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