Cluster: C34.bin_34_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C34.bin_34
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C34_contig_1083 | C34_contig_1083_134 | 151055 | 153274 | - | GH36 |
| TC | C34_contig_1083 | C34_contig_1083_135 | 153417 | 154340 | + | 2.A.7.3.53 |
| pfam | C34_contig_1083 | C34_contig_1083_136 | 154480 | 154983 | + | CarD_TRCF_RID |
| pfam | C34_contig_1083 | C34_contig_1083_137 | 154984 | 155430 | + | Tyr_Deacylase |
| TC | C34_contig_1083 | C34_contig_1083_138 | 155649 | 156938 | + | 3.A.11.1.2 |
Gene ID: C34_contig_1083_134
Type: CAZyme
Location: 151055 - 153274 (-)
Type: CAZyme
Location: 151055 - 153274 (-)
Gene ID: C34_contig_1083_135
Type: TC
Location: 153417 - 154340 (+)
Type: TC
Location: 153417 - 154340 (+)
Gene ID: C34_contig_1083_136
Type: pfam
Location: 154480 - 154983 (+)
Type: pfam
Location: 154480 - 154983 (+)
Gene ID: C34_contig_1083_137
Type: pfam
Location: 154984 - 155430 (+)
Type: pfam
Location: 154984 - 155430 (+)
Gene ID: C34_contig_1083_138
Type: TC
Location: 155649 - 156938 (+)
Type: TC
Location: 155649 - 156938 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C34_contig_1083_134 | vegan > omnivore | 1.92114 | 0.01729 |
| C34_contig_1083_135 | vegan > omnivore | 1.54740 | 0.01729 |
| C34_contig_1083_137 | vegan > omnivore | 1.99354 | 0.01729 |
| C34_contig_1083_138 | vegan > omnivore | 1.68921 | 0.01729 |