Cluster: C34.bin_34_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C34.bin_34
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C34_contig_2032 | C34_contig_2032_75 | 83565 | 84698 | + | CE9 |
| sulfatase | C34_contig_2032 | C34_contig_2032_76 | 84719 | 85447 | + | S1_9 |
| TC | C34_contig_2032 | C34_contig_2032_77 | 85605 | 86933 | + | 3.A.1.1.34 |
| TC | C34_contig_2032 | C34_contig_2032_78 | 87025 | 87927 | + | 3.A.1.1.7 |
| TC | C34_contig_2032 | C34_contig_2032_79 | 87927 | 88769 | + | 3.A.1.1.25 |
Gene ID: C34_contig_2032_75
Type: CAZyme
Location: 83565 - 84698 (+)
Type: CAZyme
Location: 83565 - 84698 (+)
Gene ID: C34_contig_2032_76
Type: sulfatase
Location: 84719 - 85447 (+)
Type: sulfatase
Location: 84719 - 85447 (+)
Gene ID: C34_contig_2032_77
Type: TC
Location: 85605 - 86933 (+)
Type: TC
Location: 85605 - 86933 (+)
Gene ID: C34_contig_2032_78
Type: TC
Location: 87025 - 87927 (+)
Type: TC
Location: 87025 - 87927 (+)
Gene ID: C34_contig_2032_79
Type: TC
Location: 87927 - 88769 (+)
Type: TC
Location: 87927 - 88769 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C34_contig_2032_75 | vegan > omnivore | 2.37562 | 0.01729 |
| C34_contig_2032_77 | vegan > omnivore | 1.70598 | 0.01729 |
| C34_contig_2032_78 | vegan > omnivore | 2.91639 | 0.01729 |
| C34_contig_2032_79 | vegan > omnivore | 1.90082 | 0.01729 |