Cluster: C34.bin_34_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C34.bin_34
- CGC Family ID: CGCFAM_00330
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C34_contig_2032 | C34_contig_2032_62 | 66797 | 68527 | + | 3.A.1.135.7 |
| TC | C34_contig_2032 | C34_contig_2032_63 | 68524 | 70263 | + | 3.A.1.135.7 |
| CAZyme | C34_contig_2032 | C34_contig_2032_64 | 70487 | 71632 | + | CBM50 |
Gene ID: C34_contig_2032_62
Type: TC
Location: 66797 - 68527 (+)
Type: TC
Location: 66797 - 68527 (+)
Gene ID: C34_contig_2032_63
Type: TC
Location: 68524 - 70263 (+)
Type: TC
Location: 68524 - 70263 (+)
Gene ID: C34_contig_2032_64
Type: CAZyme
Location: 70487 - 71632 (+)
Type: CAZyme
Location: 70487 - 71632 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C34_contig_2032_62 | vegan > omnivore | 2.33293 | 0.01489 |
| C34_contig_2032_62 | vegetarian > omnivore | 1.29286 | 0.04290 |
| C34_contig_2032_64 | vegan > omnivore | 2.11186 | 0.01729 |