Cluster: C34.bin_34_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: C34.bin_34
- CGC Family ID: CGCFAM_00039
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C34_contig_3 | C34_contig_3_825 | 854323 | 855294 | - | GT2 |
| pfam | C34_contig_3 | C34_contig_3_826 | 855305 | 856414 | - | LytR_cpsA_psr |
| TC | C34_contig_3 | C34_contig_3_827 | 856434 | 857855 | - | 9.B.18.1.1 |
| CAZyme | C34_contig_3 | C34_contig_3_828 | 857959 | 859785 | - | GT2 | GT2 |
Gene ID: C34_contig_3_825
Type: CAZyme
Location: 854323 - 855294 (-)
Type: CAZyme
Location: 854323 - 855294 (-)
Gene ID: C34_contig_3_826
Type: pfam
Location: 855305 - 856414 (-)
Type: pfam
Location: 855305 - 856414 (-)
Gene ID: C34_contig_3_827
Type: TC
Location: 856434 - 857855 (-)
Type: TC
Location: 856434 - 857855 (-)
Gene ID: C34_contig_3_828
Type: CAZyme
Location: 857959 - 859785 (-)
Type: CAZyme
Location: 857959 - 859785 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C34_contig_3_825 | vegan > omnivore | 1.22468 | 0.01729 |
| C34_contig_3_826 | vegan > omnivore | 2.56077 | 0.01729 |
| C34_contig_3_828 | vegan > omnivore | 1.62647 | 0.01729 |