Cluster: C34.bin_34_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C34.bin_34
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C34_contig_3 | C34_contig_3_778 | 798935 | 799924 | - | GH179 |
| STP | C34_contig_3 | C34_contig_3_779 | 799944 | 802289 | - | ACT | HD |
| pfam | C34_contig_3 | C34_contig_3_780 | 802401 | 804161 | - | DHH | DHHA1 | RecJ_OB |
| TC | C34_contig_3 | C34_contig_3_781 | 804252 | 806396 | - | 2.A.6.4.2 |
Gene ID: C34_contig_3_778
Type: CAZyme
Location: 798935 - 799924 (-)
Type: CAZyme
Location: 798935 - 799924 (-)
Gene ID: C34_contig_3_779
Type: STP
Location: 799944 - 802289 (-)
Type: STP
Location: 799944 - 802289 (-)
Gene ID: C34_contig_3_780
Type: pfam
Location: 802401 - 804161 (-)
Type: pfam
Location: 802401 - 804161 (-)
Gene ID: C34_contig_3_781
Type: TC
Location: 804252 - 806396 (-)
Type: TC
Location: 804252 - 806396 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C34_contig_3_778 | vegan > omnivore | 2.09823 | 0.01729 |
| C34_contig_3_780 | vegan > omnivore | 1.47754 | 0.01729 |