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Cluster: C34.bin_34_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C34_contig_3 C34_contig_3_641 650478 650864 - 9.B.70.1.1
pfam C34_contig_3 C34_contig_3_642 650940 651134 - SpoIIIAC
pfam C34_contig_3 C34_contig_3_643 651146 651664 - Spore_III_AB
TC C34_contig_3 C34_contig_3_644 651687 652691 - 9.B.70.1.1
pfam C34_contig_3 C34_contig_3_645 652790 653800 - NAD_Gly3P_dh_N | ApbA | NAD_binding_2 | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact
TC C34_contig_3 C34_contig_3_646 653832 654476 - 9.B.31.1.2
pfam C34_contig_3 C34_contig_3_647 654479 655807 - GTP_EFTU | MMR_HSR1 | MMR_HSR1 | FeoB_N | FeoB_N | AIG1 | KH_dom-like
STP C34_contig_3 C34_contig_3_648 655942 657114 + Pribosyltran
CAZyme C34_contig_3 C34_contig_3_649 657199 658650 - CE4
Gene ID: C34_contig_3_641
Type: TC
Location: 650478 - 650864 (-)
Gene ID: C34_contig_3_642
Type: pfam
Location: 650940 - 651134 (-)
Gene ID: C34_contig_3_643
Type: pfam
Location: 651146 - 651664 (-)
Gene ID: C34_contig_3_644
Type: TC
Location: 651687 - 652691 (-)
Gene ID: C34_contig_3_645
Type: pfam
Location: 652790 - 653800 (-)
Gene ID: C34_contig_3_646
Type: TC
Location: 653832 - 654476 (-)
Gene ID: C34_contig_3_647
Type: pfam
Location: 654479 - 655807 (-)
Gene ID: C34_contig_3_648
Type: STP
Location: 655942 - 657114 (+)
Gene ID: C34_contig_3_649
Type: CAZyme
Location: 657199 - 658650 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C34_contig_3_643 vegan > omnivore 1.06553 0.01729
C34_contig_3_644 vegan > omnivore 1.76369 0.01729
C34_contig_3_644 vegetarian > omnivore 2.60949 0.04290
C34_contig_3_645 vegan > omnivore 1.24131 0.01729
C34_contig_3_646 vegan > omnivore 2.31102 0.01729
C34_contig_3_649 vegan > omnivore 1.50352 0.01729

🧭 Explore Read Mapping of CGC

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