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Cluster: C34.bin_34_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C34_contig_3 C34_contig_3_550 557364 558029 - 3.A.1.125.3
STP C34_contig_3 C34_contig_3_551 558105 559259 - HATPase_c | HisKA
TF C34_contig_3 C34_contig_3_552 559243 559956 - Trans_reg_C
CAZyme C34_contig_3 C34_contig_3_553 559970 563035 - GH2
pfam C34_contig_3 C34_contig_3_554 563135 564154 - KARI_C | 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored | KARI_N
STP C34_contig_3 C34_contig_3_555 564250 564747 - ACT
TC C34_contig_3 C34_contig_3_556 564867 566669 - 3.A.1.120.6
Gene ID: C34_contig_3_550
Type: TC
Location: 557364 - 558029 (-)
Gene ID: C34_contig_3_551
Type: STP
Location: 558105 - 559259 (-)
Gene ID: C34_contig_3_552
Type: TF
Location: 559243 - 559956 (-)
Gene ID: C34_contig_3_553
Type: CAZyme
Location: 559970 - 563035 (-)
Gene ID: C34_contig_3_554
Type: pfam
Location: 563135 - 564154 (-)
Gene ID: C34_contig_3_555
Type: STP
Location: 564250 - 564747 (-)
Gene ID: C34_contig_3_556
Type: TC
Location: 564867 - 566669 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C34_contig_3_550 vegan > omnivore 1.33225 0.01729
C34_contig_3_551 vegan > omnivore 1.71956 0.01729
C34_contig_3_553 vegan > omnivore 1.65814 0.01729
C34_contig_3_554 vegan > omnivore 1.06299 0.01729
C34_contig_3_555 vegan > omnivore 1.54542 0.01729

🧭 Explore Read Mapping of CGC

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