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Cluster: C34.bin_34_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C34_contig_8059 C34_contig_8059_16 11629 12936 + GH13_20
pfam C34_contig_8059 C34_contig_8059_17 13090 14310 - tRNA-synt_1b | S4 | SYY_C-terminal
TC C34_contig_8059 C34_contig_8059_18 14792 16597 - 2.A.58.2.2
pfam C34_contig_8059 C34_contig_8059_19 16787 17575 - PseudoU_synth_1 | PseudoU_synth_1
TC C34_contig_8059 C34_contig_8059_20 17563 18387 - 3.A.1.26.7
TC C34_contig_8059 C34_contig_8059_21 18380 19231 - 3.A.1.26.7
TC C34_contig_8059 C34_contig_8059_22 19216 20070 - 3.A.1.26.7
Gene ID: C34_contig_8059_16
Type: CAZyme
Location: 11629 - 12936 (+)
Gene ID: C34_contig_8059_17
Type: pfam
Location: 13090 - 14310 (-)
Gene ID: C34_contig_8059_18
Type: TC
Location: 14792 - 16597 (-)
Gene ID: C34_contig_8059_19
Type: pfam
Location: 16787 - 17575 (-)
Gene ID: C34_contig_8059_20
Type: TC
Location: 17563 - 18387 (-)
Gene ID: C34_contig_8059_21
Type: TC
Location: 18380 - 19231 (-)
Gene ID: C34_contig_8059_22
Type: TC
Location: 19216 - 20070 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C34_contig_8059_18 vegan > omnivore 1.92258 0.01729
C34_contig_8059_19 vegan > omnivore 2.25932 0.01729

🧭 Explore Read Mapping of CGC

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