Cluster: C34.CMAG_1_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C34.CMAG_1
- CGC Family ID: CGCFAM_00134
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C34_contig_3561 | C34_contig_3561_1513 | 1596165 | 1597742 | - | 2.A.35.2.1 |
| pfam | C34_contig_3561 | C34_contig_3561_1514 | 1598043 | 1598600 | - | EFP | EFP_N | Elong-fact-P_C |
| CAZyme | C34_contig_3561 | C34_contig_3561_1515 | 1598822 | 1599910 | - | GT104 |
| pfam | C34_contig_3561 | C34_contig_3561_1516 | 1600172 | 1602061 | + | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| TC | C34_contig_3561 | C34_contig_3561_1517 | 1602045 | 1602644 | + | 4.F.1.1.8 |
Gene ID: C34_contig_3561_1513
Type: TC
Location: 1596165 - 1597742 (-)
Type: TC
Location: 1596165 - 1597742 (-)
Gene ID: C34_contig_3561_1514
Type: pfam
Location: 1598043 - 1598600 (-)
Type: pfam
Location: 1598043 - 1598600 (-)
Gene ID: C34_contig_3561_1515
Type: CAZyme
Location: 1598822 - 1599910 (-)
Type: CAZyme
Location: 1598822 - 1599910 (-)
Gene ID: C34_contig_3561_1516
Type: pfam
Location: 1600172 - 1602061 (+)
Type: pfam
Location: 1600172 - 1602061 (+)
Gene ID: C34_contig_3561_1517
Type: TC
Location: 1602045 - 1602644 (+)
Type: TC
Location: 1602045 - 1602644 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Parasutterella
Species
Parasutterella gallistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.