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Cluster: C31.bin_1_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C31_contig_41 C31_contig_41_53 57085 58431 - 3.A.5.1.1
pfam C31_contig_41 C31_contig_41_54 58456 58794 - UPF0122
TC C31_contig_41 C31_contig_41_55 58863 59855 - 9.B.102.7.7
NULL(UNKNOWN) C31_contig_41 C31_contig_41_56 59917 61761 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C31_contig_41 C31_contig_41_57 61763 62719 - GT2
pfam C31_contig_41 C31_contig_41_58 62743 63918 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
STP C31_contig_41 C31_contig_41_59 63934 65145 - PALP
TC C31_contig_41 C31_contig_41_60 65150 66094 - 3.A.5.1.1
pfam C31_contig_41 C31_contig_41_61 66108 69668 - SMC_N | SMC_hinge | AAA_21 | AAA_23
pfam C31_contig_41 C31_contig_41_62 69672 70370 - dsrm | Ribonuclease_3 | Ribonucleas_3_3
TC C31_contig_41 C31_contig_41_63 70458 70688 - 3.D.1.6.4
Gene ID: C31_contig_41_53
Type: TC
Location: 57085 - 58431 (-)
Gene ID: C31_contig_41_54
Type: pfam
Location: 58456 - 58794 (-)
Gene ID: C31_contig_41_55
Type: TC
Location: 58863 - 59855 (-)
Gene ID: C31_contig_41_56
Type:
Location: 59917 - 61761 (-)
Gene ID: C31_contig_41_57
Type: CAZyme
Location: 61763 - 62719 (-)
Gene ID: C31_contig_41_58
Type: pfam
Location: 62743 - 63918 (-)
Gene ID: C31_contig_41_59
Type: STP
Location: 63934 - 65145 (-)
Gene ID: C31_contig_41_60
Type: TC
Location: 65150 - 66094 (-)
Gene ID: C31_contig_41_61
Type: pfam
Location: 66108 - 69668 (-)
Gene ID: C31_contig_41_62
Type: pfam
Location: 69672 - 70370 (-)
Gene ID: C31_contig_41_63
Type: TC
Location: 70458 - 70688 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C31_contig_41_56 vegan > omnivore 1.01068 0.03894

🧭 Explore Read Mapping of CGC

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