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Cluster: C31.bin_1_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C31_contig_29 C31_contig_29_44 31518 33809 + 3.A.1.117.2
CAZyme C31_contig_29 C31_contig_29_45 33874 36135 - GT35
TF C31_contig_29 C31_contig_29_46 36276 37133 + HTH_AraC | HTH_AraC
TF C31_contig_29 C31_contig_29_47 37184 38209 - LacI
TC C31_contig_29 C31_contig_29_48 38498 40687 + 4.A.1.1.11
pfam C31_contig_29 C31_contig_29_49 40779 41762 + Exo_endo_phos
CAZyme C31_contig_29 C31_contig_29_50 41778 43280 + GH77
TC C31_contig_29 C31_contig_29_51 43666 45276 + 3.A.1.5.28
TC C31_contig_29 C31_contig_29_52 45334 46350 + 3.A.1.5.25
TC C31_contig_29 C31_contig_29_53 46340 47152 + 3.A.1.5.19
TC C31_contig_29 C31_contig_29_54 47164 48156 + 3.A.1.5.39
TC C31_contig_29 C31_contig_29_55 48149 49039 + 3.A.1.5.2
Gene ID: C31_contig_29_44
Type: TC
Location: 31518 - 33809 (+)
Gene ID: C31_contig_29_45
Type: CAZyme
Location: 33874 - 36135 (-)
Gene ID: C31_contig_29_46
Type: TF
Location: 36276 - 37133 (+)
Gene ID: C31_contig_29_47
Type: TF
Location: 37184 - 38209 (-)
Gene ID: C31_contig_29_48
Type: TC
Location: 38498 - 40687 (+)
Gene ID: C31_contig_29_49
Type: pfam
Location: 40779 - 41762 (+)
Gene ID: C31_contig_29_50
Type: CAZyme
Location: 41778 - 43280 (+)
Gene ID: C31_contig_29_51
Type: TC
Location: 43666 - 45276 (+)
Gene ID: C31_contig_29_52
Type: TC
Location: 45334 - 46350 (+)
Gene ID: C31_contig_29_53
Type: TC
Location: 46340 - 47152 (+)
Gene ID: C31_contig_29_54
Type: TC
Location: 47164 - 48156 (+)
Gene ID: C31_contig_29_55
Type: TC
Location: 48149 - 49039 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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