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Cluster: C19.bin_16_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C19_contig_582 C19_contig_582_925 1002701 1003804 - 3.A.1.20.4
TC C19_contig_582 C19_contig_582_926 1003808 1005529 - 3.A.1.20.4
TC C19_contig_582 C19_contig_582_927 1005526 1006608 - 3.A.1.1.16
TC C19_contig_582 C19_contig_582_928 1006671 1007663 - 3.A.1.20.4
TF C19_contig_582 C19_contig_582_929 1007935 1010028 + HTH_AraC
TC C19_contig_582 C19_contig_582_930 1010253 1011659 + 2.A.66.1.32
pfam C19_contig_582 C19_contig_582_931 1011843 1012313 - Cupin_1 | Cupin_2
CAZyme C19_contig_582 C19_contig_582_932 1012536 1013300 - GH166
Gene ID: C19_contig_582_925
Type: TC
Location: 1002701 - 1003804 (-)
Gene ID: C19_contig_582_926
Type: TC
Location: 1003808 - 1005529 (-)
Gene ID: C19_contig_582_927
Type: TC
Location: 1005526 - 1006608 (-)
Gene ID: C19_contig_582_928
Type: TC
Location: 1006671 - 1007663 (-)
Gene ID: C19_contig_582_929
Type: TF
Location: 1007935 - 1010028 (+)
Gene ID: C19_contig_582_930
Type: TC
Location: 1010253 - 1011659 (+)
Gene ID: C19_contig_582_931
Type: pfam
Location: 1011843 - 1012313 (-)
Gene ID: C19_contig_582_932
Type: CAZyme
Location: 1012536 - 1013300 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C19_contig_582_932 vegetarian > omnivore 1.75156 0.01047
C19_contig_582_932 vegetarian > vegan 1.63384 0.01232

🧭 Explore Read Mapping of CGC

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