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Cluster: C19.bin_16_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C19_contig_582 C19_contig_582_436 481531 482589 + 3.A.1.1.24
TC C19_contig_582 C19_contig_582_437 482586 483506 + 3.A.1.1.11
TC C19_contig_582 C19_contig_582_438 483511 484335 + 3.A.1.1.34
pfam C19_contig_582 C19_contig_582_439 484578 484976 + ATP-synt_I
TC C19_contig_582 C19_contig_582_440 485016 485774 + 3.A.2.1.6
TC C19_contig_582 C19_contig_582_441 485862 486131 + 3.A.2.1.2
pfam C19_contig_582 C19_contig_582_442 486165 486668 + ATP-synt_B
pfam C19_contig_582 C19_contig_582_443 486665 487201 + OSCP
TC C19_contig_582 C19_contig_582_444 487229 488740 + 3.A.2.1.5
TC C19_contig_582 C19_contig_582_445 488760 489611 + 3.A.2.1.5
TC C19_contig_582 C19_contig_582_446 489636 491039 + 3.A.2.1.5
TC C19_contig_582 C19_contig_582_447 491036 491437 + 3.A.2.1.5
CAZyme C19_contig_582 C19_contig_582_448 491486 493843 - GT51
Gene ID: C19_contig_582_436
Type: TC
Location: 481531 - 482589 (+)
Gene ID: C19_contig_582_437
Type: TC
Location: 482586 - 483506 (+)
Gene ID: C19_contig_582_438
Type: TC
Location: 483511 - 484335 (+)
Gene ID: C19_contig_582_439
Type: pfam
Location: 484578 - 484976 (+)
Gene ID: C19_contig_582_440
Type: TC
Location: 485016 - 485774 (+)
Gene ID: C19_contig_582_441
Type: TC
Location: 485862 - 486131 (+)
Gene ID: C19_contig_582_442
Type: pfam
Location: 486165 - 486668 (+)
Gene ID: C19_contig_582_443
Type: pfam
Location: 486665 - 487201 (+)
Gene ID: C19_contig_582_444
Type: TC
Location: 487229 - 488740 (+)
Gene ID: C19_contig_582_445
Type: TC
Location: 488760 - 489611 (+)
Gene ID: C19_contig_582_446
Type: TC
Location: 489636 - 491039 (+)
Gene ID: C19_contig_582_447
Type: TC
Location: 491036 - 491437 (+)
Gene ID: C19_contig_582_448
Type: CAZyme
Location: 491486 - 493843 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C19_contig_582_448 vegetarian > omnivore 1.28285 0.01047

🧭 Explore Read Mapping of CGC

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