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Cluster: C19.bin_16_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C19_contig_1130 C19_contig_1130_251 278537 279193 - 9.B.18.1.2
CAZyme C19_contig_1130 C19_contig_1130_252 279213 280238 - GT2
pfam C19_contig_1130 C19_contig_1130_253 280314 281627 - Wzy_C
CAZyme C19_contig_1130 C19_contig_1130_254 281608 282804 - GT4
CAZyme C19_contig_1130 C19_contig_1130_255 283122 284222 - GT4
CAZyme C19_contig_1130 C19_contig_1130_256 284219 285250 - GT2
TC C19_contig_1130 C19_contig_1130_257 285797 287443 - 3.A.1.135.9
TC C19_contig_1130 C19_contig_1130_258 287433 289178 - 3.A.1.117.2
Gene ID: C19_contig_1130_251
Type: TC
Location: 278537 - 279193 (-)
Gene ID: C19_contig_1130_252
Type: CAZyme
Location: 279213 - 280238 (-)
Gene ID: C19_contig_1130_253
Type: pfam
Location: 280314 - 281627 (-)
Gene ID: C19_contig_1130_254
Type: CAZyme
Location: 281608 - 282804 (-)
Gene ID: C19_contig_1130_255
Type: CAZyme
Location: 283122 - 284222 (-)
Gene ID: C19_contig_1130_256
Type: CAZyme
Location: 284219 - 285250 (-)
Gene ID: C19_contig_1130_257
Type: TC
Location: 285797 - 287443 (-)
Gene ID: C19_contig_1130_258
Type: TC
Location: 287433 - 289178 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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