Cluster: C19.bin_16_CGC17
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: C19.bin_16
- CGC Family ID: CGCFAM_00041
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C19_contig_1130 | C19_contig_1130_231 | 258095 | 258934 | - | 3.A.1.29.1 |
| TC | C19_contig_1130 | C19_contig_1130_232 | 258924 | 260636 | - | 3.A.1.29.1 |
| TC | C19_contig_1130 | C19_contig_1130_233 | 260719 | 261270 | - | 3.A.1.29.1 |
| NULL(UNKNOWN) | C19_contig_1130 | C19_contig_1130_234 | 261336 | 261524 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C19_contig_1130 | C19_contig_1130_235 | 261616 | 262662 | - | 3.A.1.1.11 |
| TC | C19_contig_1130 | C19_contig_1130_236 | 262666 | 263607 | - | 3.A.1.1.11 |
| TC | C19_contig_1130 | C19_contig_1130_237 | 263691 | 264956 | - | 3.A.1.1.11 |
| CAZyme | C19_contig_1130 | C19_contig_1130_238 | 265227 | 266306 | - | GH105 |
| CAZyme | C19_contig_1130 | C19_contig_1130_239 | 266319 | 267557 | - | GH28 |
| pfam | C19_contig_1130 | C19_contig_1130_240 | 267557 | 268006 | - | LacAB_rpiB |
| NULL(UNKNOWN) | C19_contig_1130 | C19_contig_1130_241 | 268310 | 268549 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C19_contig_1130 | C19_contig_1130_242 | 268564 | 269289 | - | CE4 |
Gene ID: C19_contig_1130_231
Type: TC
Location: 258095 - 258934 (-)
Type: TC
Location: 258095 - 258934 (-)
Gene ID: C19_contig_1130_232
Type: TC
Location: 258924 - 260636 (-)
Type: TC
Location: 258924 - 260636 (-)
Gene ID: C19_contig_1130_233
Type: TC
Location: 260719 - 261270 (-)
Type: TC
Location: 260719 - 261270 (-)
Gene ID: C19_contig_1130_234
Type:
Location: 261336 - 261524 (-)
Type:
Location: 261336 - 261524 (-)
Gene ID: C19_contig_1130_235
Type: TC
Location: 261616 - 262662 (-)
Type: TC
Location: 261616 - 262662 (-)
Gene ID: C19_contig_1130_236
Type: TC
Location: 262666 - 263607 (-)
Type: TC
Location: 262666 - 263607 (-)
Gene ID: C19_contig_1130_237
Type: TC
Location: 263691 - 264956 (-)
Type: TC
Location: 263691 - 264956 (-)
Gene ID: C19_contig_1130_238
Type: CAZyme
Location: 265227 - 266306 (-)
Type: CAZyme
Location: 265227 - 266306 (-)
Gene ID: C19_contig_1130_239
Type: CAZyme
Location: 266319 - 267557 (-)
Type: CAZyme
Location: 266319 - 267557 (-)
Gene ID: C19_contig_1130_240
Type: pfam
Location: 267557 - 268006 (-)
Type: pfam
Location: 267557 - 268006 (-)
Gene ID: C19_contig_1130_241
Type:
Location: 268310 - 268549 (-)
Type:
Location: 268310 - 268549 (-)
Gene ID: C19_contig_1130_242
Type: CAZyme
Location: 268564 - 269289 (-)
Type: CAZyme
Location: 268564 - 269289 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola sp900542445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.