Cluster: C19.bin_16_CGC15
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate:
- Genome ID: C19.bin_16
- CGC Family ID: CGCFAM_00007
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C19_contig_582 | C19_contig_582_2379 | 2625259 | 2626416 | + | GT4 |
| CAZyme | C19_contig_582 | C19_contig_582_2380 | 2626474 | 2627538 | + | GT4 |
| NULL(UNKNOWN) | C19_contig_582 | C19_contig_582_2381 | 2627532 | 2628815 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C19_contig_582 | C19_contig_582_2382 | 2628769 | 2629884 | + | GT2 |
| CAZyme | C19_contig_582 | C19_contig_582_2383 | 2629897 | 2630892 | + | GT2 |
| CAZyme | C19_contig_582 | C19_contig_582_2384 | 2630903 | 2631862 | + | GT2 |
| CAZyme | C19_contig_582 | C19_contig_582_2385 | 2631893 | 2633713 | + | PL12_3 |
| pfam | C19_contig_582 | C19_contig_582_2386 | 2633752 | 2634981 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| pfam | C19_contig_582 | C19_contig_582_2387 | 2634978 | 2636072 | + | Epimerase_2 |
| CAZyme | C19_contig_582 | C19_contig_582_2388 | 2636083 | 2636859 | + | GT26 |
| TC | C19_contig_582 | C19_contig_582_2389 | 2636882 | 2638417 | + | 2.A.66.1.40 |
Gene ID: C19_contig_582_2379
Type: CAZyme
Location: 2625259 - 2626416 (+)
Type: CAZyme
Location: 2625259 - 2626416 (+)
Gene ID: C19_contig_582_2380
Type: CAZyme
Location: 2626474 - 2627538 (+)
Type: CAZyme
Location: 2626474 - 2627538 (+)
Gene ID: C19_contig_582_2381
Type:
Location: 2627532 - 2628815 (+)
Type:
Location: 2627532 - 2628815 (+)
Gene ID: C19_contig_582_2382
Type: CAZyme
Location: 2628769 - 2629884 (+)
Type: CAZyme
Location: 2628769 - 2629884 (+)
Gene ID: C19_contig_582_2383
Type: CAZyme
Location: 2629897 - 2630892 (+)
Type: CAZyme
Location: 2629897 - 2630892 (+)
Gene ID: C19_contig_582_2384
Type: CAZyme
Location: 2630903 - 2631862 (+)
Type: CAZyme
Location: 2630903 - 2631862 (+)
Gene ID: C19_contig_582_2385
Type: CAZyme
Location: 2631893 - 2633713 (+)
Type: CAZyme
Location: 2631893 - 2633713 (+)
Gene ID: C19_contig_582_2386
Type: pfam
Location: 2633752 - 2634981 (+)
Type: pfam
Location: 2633752 - 2634981 (+)
Gene ID: C19_contig_582_2387
Type: pfam
Location: 2634978 - 2636072 (+)
Type: pfam
Location: 2634978 - 2636072 (+)
Gene ID: C19_contig_582_2388
Type: CAZyme
Location: 2636083 - 2636859 (+)
Type: CAZyme
Location: 2636083 - 2636859 (+)
Gene ID: C19_contig_582_2389
Type: TC
Location: 2636882 - 2638417 (+)
Type: TC
Location: 2636882 - 2638417 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Ventricola
Species
Ventricola sp900542445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.