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Cluster: C19.bin_16_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C19_contig_582 C19_contig_582_291 319795 320838 + GT2
CAZyme C19_contig_582 C19_contig_582_292 320835 321857 + GT2
CAZyme C19_contig_582 C19_contig_582_293 321854 322774 + GT2
CAZyme C19_contig_582 C19_contig_582_294 322790 323773 + GT2
pfam C19_contig_582 C19_contig_582_295 323770 324942 + PS_pyruv_trans
STP C19_contig_582 C19_contig_582_296 324939 326129 + Fer4
TC C19_contig_582 C19_contig_582_297 326200 327576 + 2.A.66.1.33
TC C19_contig_582 C19_contig_582_298 327706 330039 + 3.A.11.2.1
Gene ID: C19_contig_582_291
Type: CAZyme
Location: 319795 - 320838 (+)
Gene ID: C19_contig_582_292
Type: CAZyme
Location: 320835 - 321857 (+)
Gene ID: C19_contig_582_293
Type: CAZyme
Location: 321854 - 322774 (+)
Gene ID: C19_contig_582_294
Type: CAZyme
Location: 322790 - 323773 (+)
Gene ID: C19_contig_582_295
Type: pfam
Location: 323770 - 324942 (+)
Gene ID: C19_contig_582_296
Type: STP
Location: 324939 - 326129 (+)
Gene ID: C19_contig_582_297
Type: TC
Location: 326200 - 327576 (+)
Gene ID: C19_contig_582_298
Type: TC
Location: 327706 - 330039 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C19_contig_582_296 vegetarian > omnivore 1.02844 0.01047

🧭 Explore Read Mapping of CGC

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