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Cluster: C162.bin_30_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C162_contig_4756 C162_contig_4756_560 648500 649423 - 3.A.1.1.11
TC C162_contig_4756 C162_contig_4756_561 649425 650297 - 3.A.1.1.11
STP C162_contig_4756 C162_contig_4756_562 650402 651988 - SBP_bac_1
pfam C162_contig_4756 C162_contig_4756_563 652334 655432 - DUF4832
CAZyme C162_contig_4756 C162_contig_4756_564 656025 657044 - GH172
pfam C162_contig_4756 C162_contig_4756_565 657415 658692 - GFO_IDH_MocA
CAZyme C162_contig_4756 C162_contig_4756_566 658964 661048 - GH3
Gene ID: C162_contig_4756_560
Type: TC
Location: 648500 - 649423 (-)
Gene ID: C162_contig_4756_561
Type: TC
Location: 649425 - 650297 (-)
Gene ID: C162_contig_4756_562
Type: STP
Location: 650402 - 651988 (-)
Gene ID: C162_contig_4756_563
Type: pfam
Location: 652334 - 655432 (-)
Gene ID: C162_contig_4756_564
Type: CAZyme
Location: 656025 - 657044 (-)
Gene ID: C162_contig_4756_565
Type: pfam
Location: 657415 - 658692 (-)
Gene ID: C162_contig_4756_566
Type: CAZyme
Location: 658964 - 661048 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C162_contig_4756_566 vegan > omnivore 1.50524 0.01587

🧭 Explore Read Mapping of CGC

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