Cluster: C162.bin_30_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: C162.bin_30
- CGC Family ID: CGCFAM_00448
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C162_contig_4756 | C162_contig_4756_482 | 552143 | 554272 | - | GH36 |
| CAZyme | C162_contig_4756 | C162_contig_4756_483 | 554597 | 556261 | - | GH28 |
| CAZyme | C162_contig_4756 | C162_contig_4756_484 | 556525 | 558258 | - | GH28 |
| CAZyme | C162_contig_4756 | C162_contig_4756_485 | 558268 | 559980 | - | GH28 |
| TC | C162_contig_4756 | C162_contig_4756_486 | 560010 | 560948 | - | 3.A.1.1.29 |
| TC | C162_contig_4756 | C162_contig_4756_487 | 560961 | 561962 | - | 3.A.1.1.10 |
| CAZyme | C162_contig_4756 | C162_contig_4756_488 | 561997 | 563655 | - | GH28 |
Gene ID: C162_contig_4756_482
Type: CAZyme
Location: 552143 - 554272 (-)
Type: CAZyme
Location: 552143 - 554272 (-)
Gene ID: C162_contig_4756_483
Type: CAZyme
Location: 554597 - 556261 (-)
Type: CAZyme
Location: 554597 - 556261 (-)
Gene ID: C162_contig_4756_484
Type: CAZyme
Location: 556525 - 558258 (-)
Type: CAZyme
Location: 556525 - 558258 (-)
Gene ID: C162_contig_4756_485
Type: CAZyme
Location: 558268 - 559980 (-)
Type: CAZyme
Location: 558268 - 559980 (-)
Gene ID: C162_contig_4756_486
Type: TC
Location: 560010 - 560948 (-)
Type: TC
Location: 560010 - 560948 (-)
Gene ID: C162_contig_4756_487
Type: TC
Location: 560961 - 561962 (-)
Type: TC
Location: 560961 - 561962 (-)
Gene ID: C162_contig_4756_488
Type: CAZyme
Location: 561997 - 563655 (-)
Type: CAZyme
Location: 561997 - 563655 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900552625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C162_contig_4756_482 | vegan > omnivore | 1.46797 | 0.01587 |
| C162_contig_4756_483 | vegan > omnivore | 1.36609 | 0.01587 |
| C162_contig_4756_483 | vegetarian > omnivore | 1.60155 | 0.00782 |
| C162_contig_4756_487 | vegan > omnivore | 1.20061 | 0.01587 |
| C162_contig_4756_488 | vegan > omnivore | 1.30835 | 0.01587 |
| C162_contig_4756_488 | vegetarian > omnivore | 1.00838 | 0.00782 |