Cluster: C162.bin_30_CGC36
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: C162.bin_30
- CGC Family ID: CGCFAM_07945
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C162_contig_5753 | C162_contig_5753_338 | 443115 | 445097 | - | CE20 |
| CAZyme | C162_contig_5753 | C162_contig_5753_339 | 445209 | 446564 | - | GH1 |
| pfam | C162_contig_5753 | C162_contig_5753_340 | 446606 | 448228 | - | SBP_bac_8 |
| TC | C162_contig_5753 | C162_contig_5753_341 | 448248 | 449117 | - | 3.A.1.1.29 |
| TC | C162_contig_5753 | C162_contig_5753_342 | 449110 | 450030 | - | 3.A.1.1.10 |
| NULL(UNKNOWN) | C162_contig_5753 | C162_contig_5753_343 | 450039 | 450725 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C162_contig_5753 | C162_contig_5753_344 | 450729 | 453167 | - | GH36 |
| NULL(UNKNOWN) | C162_contig_5753 | C162_contig_5753_345 | 453164 | 455701 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C162_contig_5753 | C162_contig_5753_346 | 455894 | 457567 | + | 8.A.59.2.1 |
Gene ID: C162_contig_5753_338
Type: CAZyme
Location: 443115 - 445097 (-)
Type: CAZyme
Location: 443115 - 445097 (-)
Gene ID: C162_contig_5753_339
Type: CAZyme
Location: 445209 - 446564 (-)
Type: CAZyme
Location: 445209 - 446564 (-)
Gene ID: C162_contig_5753_340
Type: pfam
Location: 446606 - 448228 (-)
Type: pfam
Location: 446606 - 448228 (-)
Gene ID: C162_contig_5753_341
Type: TC
Location: 448248 - 449117 (-)
Type: TC
Location: 448248 - 449117 (-)
Gene ID: C162_contig_5753_342
Type: TC
Location: 449110 - 450030 (-)
Type: TC
Location: 449110 - 450030 (-)
Gene ID: C162_contig_5753_343
Type:
Location: 450039 - 450725 (-)
Type:
Location: 450039 - 450725 (-)
Gene ID: C162_contig_5753_344
Type: CAZyme
Location: 450729 - 453167 (-)
Type: CAZyme
Location: 450729 - 453167 (-)
Gene ID: C162_contig_5753_345
Type:
Location: 453164 - 455701 (-)
Type:
Location: 453164 - 455701 (-)
Gene ID: C162_contig_5753_346
Type: TC
Location: 455894 - 457567 (+)
Type: TC
Location: 455894 - 457567 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900552625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C162_contig_5753_340 | vegan > omnivore | 1.58586 | 0.01587 |
| C162_contig_5753_341 | vegan > omnivore | 1.74233 | 0.01587 |
| C162_contig_5753_341 | vegetarian > omnivore | 1.41456 | 0.00782 |
| C162_contig_5753_343 | vegan > omnivore | 2.84129 | 0.01587 |
| C162_contig_5753_343 | vegetarian > omnivore | 1.42313 | 0.00782 |
| C162_contig_5753_346 | vegan > omnivore | 2.14862 | 0.01587 |
| C162_contig_5753_346 | vegetarian > omnivore | 1.05677 | 0.00782 |