Cluster: C162.bin_30_CGC33
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: C162.bin_30
- CGC Family ID: CGCFAM_00561
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C162_contig_5753 | C162_contig_5753_78 | 107026 | 108924 | + | 3.A.1.106.2 |
| TF | C162_contig_5753 | C162_contig_5753_79 | 109599 | 110552 | - | HTH_5 |
| CAZyme | C162_contig_5753 | C162_contig_5753_80 | 110978 | 112756 | + | GH2 |
| NULL(UNKNOWN) | C162_contig_5753 | C162_contig_5753_81 | 112774 | 114483 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C162_contig_5753 | C162_contig_5753_82 | 114500 | 115426 | + | BPD_transp_1 |
| TC | C162_contig_5753 | C162_contig_5753_83 | 115437 | 116336 | + | 3.A.1.1.18 |
| pfam | C162_contig_5753 | C162_contig_5753_84 | 116505 | 119477 | + | Big_3_2 |
| CAZyme | C162_contig_5753 | C162_contig_5753_85 | 119490 | 121448 | + | GH163 |
Gene ID: C162_contig_5753_78
Type: TC
Location: 107026 - 108924 (+)
Type: TC
Location: 107026 - 108924 (+)
Gene ID: C162_contig_5753_79
Type: TF
Location: 109599 - 110552 (-)
Type: TF
Location: 109599 - 110552 (-)
Gene ID: C162_contig_5753_80
Type: CAZyme
Location: 110978 - 112756 (+)
Type: CAZyme
Location: 110978 - 112756 (+)
Gene ID: C162_contig_5753_81
Type:
Location: 112774 - 114483 (+)
Type:
Location: 112774 - 114483 (+)
Gene ID: C162_contig_5753_82
Type: pfam
Location: 114500 - 115426 (+)
Type: pfam
Location: 114500 - 115426 (+)
Gene ID: C162_contig_5753_83
Type: TC
Location: 115437 - 116336 (+)
Type: TC
Location: 115437 - 116336 (+)
Gene ID: C162_contig_5753_84
Type: pfam
Location: 116505 - 119477 (+)
Type: pfam
Location: 116505 - 119477 (+)
Gene ID: C162_contig_5753_85
Type: CAZyme
Location: 119490 - 121448 (+)
Type: CAZyme
Location: 119490 - 121448 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900552625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C162_contig_5753_80 | vegan > omnivore | 1.60527 | 0.01587 |
| C162_contig_5753_80 | vegetarian > omnivore | 1.12787 | 0.00782 |
| C162_contig_5753_82 | vegan > omnivore | 1.03096 | 0.01587 |
| C162_contig_5753_82 | vegetarian > omnivore | 1.69882 | 0.00782 |
| C162_contig_5753_83 | vegetarian > omnivore | 1.06842 | 0.00782 |
| C162_contig_5753_85 | vegan > omnivore | 1.25629 | 0.01587 |
| C162_contig_5753_85 | vegetarian > omnivore | 1.11411 | 0.00782 |