Cluster: C162.bin_30_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C162.bin_30
- CGC Family ID: CGCFAM_00514
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C162_contig_3411 | C162_contig_3411_296 | 419891 | 421828 | + | CE20 |
| TF | C162_contig_3411 | C162_contig_3411_297 | 421990 | 422964 | - | HTH_AraC | HTH_AraC |
| TC | C162_contig_3411 | C162_contig_3411_298 | 423310 | 424305 | + | 3.A.1.1.10 |
| TC | C162_contig_3411 | C162_contig_3411_299 | 424317 | 425204 | + | 3.A.1.1.10 |
Gene ID: C162_contig_3411_296
Type: CAZyme
Location: 419891 - 421828 (+)
Type: CAZyme
Location: 419891 - 421828 (+)
Gene ID: C162_contig_3411_297
Type: TF
Location: 421990 - 422964 (-)
Type: TF
Location: 421990 - 422964 (-)
Gene ID: C162_contig_3411_298
Type: TC
Location: 423310 - 424305 (+)
Type: TC
Location: 423310 - 424305 (+)
Gene ID: C162_contig_3411_299
Type: TC
Location: 424317 - 425204 (+)
Type: TC
Location: 424317 - 425204 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900552625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C162_contig_3411_298 | vegan > omnivore | 2.26716 | 0.01587 |
| C162_contig_3411_298 | vegetarian > omnivore | 1.18481 | 0.00782 |