Cluster: C162.bin_30_CGC23
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: C162.bin_30
- CGC Family ID: CGCFAM_00824
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C162_contig_3411 | C162_contig_3411_68 | 84417 | 85331 | + | 3.A.1.1.10 |
| TC | C162_contig_3411 | C162_contig_3411_69 | 85333 | 86214 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | C162_contig_3411 | C162_contig_3411_70 | 86280 | 87950 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C162_contig_3411 | C162_contig_3411_71 | 87964 | 89841 | + | GH136 |
| pfam | C162_contig_3411 | C162_contig_3411_72 | 89867 | 91099 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| CAZyme | C162_contig_3411 | C162_contig_3411_73 | 91110 | 93368 | + | GH94 |
| TC | C162_contig_3411 | C162_contig_3411_74 | 94434 | 95414 | + | 2.A.19.5.3 |
| CAZyme | C162_contig_3411 | C162_contig_3411_75 | 96291 | 97859 | + | GT2 |
Gene ID: C162_contig_3411_68
Type: TC
Location: 84417 - 85331 (+)
Type: TC
Location: 84417 - 85331 (+)
Gene ID: C162_contig_3411_69
Type: TC
Location: 85333 - 86214 (+)
Type: TC
Location: 85333 - 86214 (+)
Gene ID: C162_contig_3411_70
Type:
Location: 86280 - 87950 (+)
Type:
Location: 86280 - 87950 (+)
Gene ID: C162_contig_3411_71
Type: CAZyme
Location: 87964 - 89841 (+)
Type: CAZyme
Location: 87964 - 89841 (+)
Gene ID: C162_contig_3411_72
Type: pfam
Location: 89867 - 91099 (+)
Type: pfam
Location: 89867 - 91099 (+)
Gene ID: C162_contig_3411_73
Type: CAZyme
Location: 91110 - 93368 (+)
Type: CAZyme
Location: 91110 - 93368 (+)
Gene ID: C162_contig_3411_74
Type: TC
Location: 94434 - 95414 (+)
Type: TC
Location: 94434 - 95414 (+)
Gene ID: C162_contig_3411_75
Type: CAZyme
Location: 96291 - 97859 (+)
Type: CAZyme
Location: 96291 - 97859 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900552625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C162_contig_3411_68 | vegan > omnivore | 2.07552 | 0.01587 |
| C162_contig_3411_70 | vegan > omnivore | 1.38248 | 0.01587 |
| C162_contig_3411_70 | vegetarian > omnivore | 1.11394 | 0.00782 |
| C162_contig_3411_71 | vegan > omnivore | 1.66135 | 0.01587 |
| C162_contig_3411_71 | vegetarian > omnivore | 1.04962 | 0.00782 |
| C162_contig_3411_72 | vegan > omnivore | 1.27972 | 0.01587 |
| C162_contig_3411_73 | vegan > omnivore | 1.57056 | 0.01587 |
| C162_contig_3411_75 | vegan > omnivore | 1.12703 | 0.01587 |