Cluster: C162.bin_30_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: C162.bin_30
- CGC Family ID: CGCFAM_02160
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C162_contig_4756 | C162_contig_4756_1667 | 2002971 | 2003861 | + | 3.A.1.1.34 |
| TC | C162_contig_4756 | C162_contig_4756_1668 | 2003867 | 2004745 | + | 3.A.1.1.11 |
| pfam | C162_contig_4756 | C162_contig_4756_1669 | 2004790 | 2008539 | + | CBM9_1 | CarboxypepD_reg | CarboxypepD_reg | CarboxypepD_reg | CarbopepD_reg_2 |
| CAZyme | C162_contig_4756 | C162_contig_4756_1670 | 2008560 | 2011058 | + | CBM66 | GH43_32 |
| CAZyme | C162_contig_4756 | C162_contig_4756_1671 | 2011177 | 2013588 | + | GH43_32 |
| CAZyme | C162_contig_4756 | C162_contig_4756_1672 | 2013638 | 2015368 | + | GH2 |
Gene ID: C162_contig_4756_1667
Type: TC
Location: 2002971 - 2003861 (+)
Type: TC
Location: 2002971 - 2003861 (+)
Gene ID: C162_contig_4756_1668
Type: TC
Location: 2003867 - 2004745 (+)
Type: TC
Location: 2003867 - 2004745 (+)
Gene ID: C162_contig_4756_1669
Type: pfam
Location: 2004790 - 2008539 (+)
Type: pfam
Location: 2004790 - 2008539 (+)
Gene ID: C162_contig_4756_1670
Type: CAZyme
Location: 2008560 - 2011058 (+)
Type: CAZyme
Location: 2008560 - 2011058 (+)
Gene ID: C162_contig_4756_1671
Type: CAZyme
Location: 2011177 - 2013588 (+)
Type: CAZyme
Location: 2011177 - 2013588 (+)
Gene ID: C162_contig_4756_1672
Type: CAZyme
Location: 2013638 - 2015368 (+)
Type: CAZyme
Location: 2013638 - 2015368 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900552625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C162_contig_4756_1667 | vegan > omnivore | 1.12170 | 0.01587 |
| C162_contig_4756_1671 | vegetarian > omnivore | 1.22432 | 0.00782 |