dbCAN Logo

Cluster: C162.bin_30_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C162_contig_4756 C162_contig_4756_1667 2002971 2003861 + 3.A.1.1.34
TC C162_contig_4756 C162_contig_4756_1668 2003867 2004745 + 3.A.1.1.11
pfam C162_contig_4756 C162_contig_4756_1669 2004790 2008539 + CBM9_1 | CarboxypepD_reg | CarboxypepD_reg | CarboxypepD_reg | CarbopepD_reg_2
CAZyme C162_contig_4756 C162_contig_4756_1670 2008560 2011058 + CBM66 | GH43_32
CAZyme C162_contig_4756 C162_contig_4756_1671 2011177 2013588 + GH43_32
CAZyme C162_contig_4756 C162_contig_4756_1672 2013638 2015368 + GH2
Gene ID: C162_contig_4756_1667
Type: TC
Location: 2002971 - 2003861 (+)
Gene ID: C162_contig_4756_1668
Type: TC
Location: 2003867 - 2004745 (+)
Gene ID: C162_contig_4756_1669
Type: pfam
Location: 2004790 - 2008539 (+)
Gene ID: C162_contig_4756_1670
Type: CAZyme
Location: 2008560 - 2011058 (+)
Gene ID: C162_contig_4756_1671
Type: CAZyme
Location: 2011177 - 2013588 (+)
Gene ID: C162_contig_4756_1672
Type: CAZyme
Location: 2013638 - 2015368 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C162_contig_4756_1667 vegan > omnivore 1.12170 0.01587
C162_contig_4756_1671 vegetarian > omnivore 1.22432 0.00782

🧭 Explore Read Mapping of CGC

← Back to Cluster List