Cluster: C162.bin_30_CGC20
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: C162.bin_30
- CGC Family ID: CGCFAM_05211
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C162_contig_4756 | C162_contig_4756_1444 | 1724206 | 1725855 | + | GH28 |
| CAZyme | C162_contig_4756 | C162_contig_4756_1445 | 1726276 | 1728891 | + | GH28 |
| NULL(UNKNOWN) | C162_contig_4756 | C162_contig_4756_1446 | 1728938 | 1731865 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | C162_contig_4756 | C162_contig_4756_1447 | 1732025 | 1733239 | + | HTH_AraC | HTH_AraC |
| TC | C162_contig_4756 | C162_contig_4756_1448 | 1733236 | 1734921 | + | 8.A.59.2.1 |
| STP | C162_contig_4756 | C162_contig_4756_1449 | 1735623 | 1736612 | - | dCache_1 |
| STP | C162_contig_4756 | C162_contig_4756_1450 | 1737172 | 1738590 | + | SBP_bac_1 |
| TC | C162_contig_4756 | C162_contig_4756_1451 | 1738602 | 1739510 | + | 3.A.1.1.20 |
| TC | C162_contig_4756 | C162_contig_4756_1452 | 1739520 | 1740416 | + | 3.A.1.1.18 |
| CAZyme | C162_contig_4756 | C162_contig_4756_1453 | 1740678 | 1742939 | + | GH65 |
Gene ID: C162_contig_4756_1444
Type: CAZyme
Location: 1724206 - 1725855 (+)
Type: CAZyme
Location: 1724206 - 1725855 (+)
Gene ID: C162_contig_4756_1445
Type: CAZyme
Location: 1726276 - 1728891 (+)
Type: CAZyme
Location: 1726276 - 1728891 (+)
Gene ID: C162_contig_4756_1446
Type:
Location: 1728938 - 1731865 (+)
Type:
Location: 1728938 - 1731865 (+)
Gene ID: C162_contig_4756_1447
Type: TF
Location: 1732025 - 1733239 (+)
Type: TF
Location: 1732025 - 1733239 (+)
Gene ID: C162_contig_4756_1448
Type: TC
Location: 1733236 - 1734921 (+)
Type: TC
Location: 1733236 - 1734921 (+)
Gene ID: C162_contig_4756_1449
Type: STP
Location: 1735623 - 1736612 (-)
Type: STP
Location: 1735623 - 1736612 (-)
Gene ID: C162_contig_4756_1450
Type: STP
Location: 1737172 - 1738590 (+)
Type: STP
Location: 1737172 - 1738590 (+)
Gene ID: C162_contig_4756_1451
Type: TC
Location: 1738602 - 1739510 (+)
Type: TC
Location: 1738602 - 1739510 (+)
Gene ID: C162_contig_4756_1452
Type: TC
Location: 1739520 - 1740416 (+)
Type: TC
Location: 1739520 - 1740416 (+)
Gene ID: C162_contig_4756_1453
Type: CAZyme
Location: 1740678 - 1742939 (+)
Type: CAZyme
Location: 1740678 - 1742939 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900552625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C162_contig_4756_1445 | vegan > omnivore | 1.19493 | 0.01587 |
| C162_contig_4756_1445 | vegetarian > omnivore | 1.21011 | 0.00782 |
| C162_contig_4756_1446 | vegetarian > omnivore | 1.05511 | 0.00782 |
| C162_contig_4756_1449 | vegan > omnivore | 1.47359 | 0.01587 |
| C162_contig_4756_1453 | vegan > omnivore | 1.12643 | 0.01587 |