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Cluster: C162.bin_30_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C162_contig_4756 C162_contig_4756_1180 1418463 1421078 + GH43_32
pfam C162_contig_4756 C162_contig_4756_1181 1421150 1422679 + SBP_bac_1
TC C162_contig_4756 C162_contig_4756_1182 1422764 1423729 + 3.A.1.1.3
TC C162_contig_4756 C162_contig_4756_1183 1423743 1424624 + 3.A.1.1.36
CAZyme C162_contig_4756 C162_contig_4756_1184 1424704 1426476 + GH2
CAZyme C162_contig_4756 C162_contig_4756_1185 1426488 1427450 + CE2
CAZyme C162_contig_4756 C162_contig_4756_1186 1427560 1428672 + GH5_13
CAZyme C162_contig_4756 C162_contig_4756_1187 1428669 1429859 + CE2
Gene ID: C162_contig_4756_1180
Type: CAZyme
Location: 1418463 - 1421078 (+)
Gene ID: C162_contig_4756_1181
Type: pfam
Location: 1421150 - 1422679 (+)
Gene ID: C162_contig_4756_1182
Type: TC
Location: 1422764 - 1423729 (+)
Gene ID: C162_contig_4756_1183
Type: TC
Location: 1423743 - 1424624 (+)
Gene ID: C162_contig_4756_1184
Type: CAZyme
Location: 1424704 - 1426476 (+)
Gene ID: C162_contig_4756_1185
Type: CAZyme
Location: 1426488 - 1427450 (+)
Gene ID: C162_contig_4756_1186
Type: CAZyme
Location: 1427560 - 1428672 (+)
Gene ID: C162_contig_4756_1187
Type: CAZyme
Location: 1428669 - 1429859 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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