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Cluster: C162.bin_30_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C162_contig_4756 C162_contig_4756_805 951276 953471 + CBM20 | GH13_2
TF C162_contig_4756 C162_contig_4756_806 953514 954635 - LacI | LacI
pfam C162_contig_4756 C162_contig_4756_807 954826 956496 + Flg_new
CAZyme C162_contig_4756 C162_contig_4756_808 956561 958204 + CBM34 | GH13_20
STP C162_contig_4756 C162_contig_4756_809 958209 959678 + SBP_bac_1
TC C162_contig_4756 C162_contig_4756_810 959692 961047 + 3.A.1.1.27
TC C162_contig_4756 C162_contig_4756_811 961047 961904 + 3.A.1.1.27
CAZyme C162_contig_4756 C162_contig_4756_812 961907 964156 + GT35
Gene ID: C162_contig_4756_805
Type: CAZyme
Location: 951276 - 953471 (+)
Gene ID: C162_contig_4756_806
Type: TF
Location: 953514 - 954635 (-)
Gene ID: C162_contig_4756_807
Type: pfam
Location: 954826 - 956496 (+)
Gene ID: C162_contig_4756_808
Type: CAZyme
Location: 956561 - 958204 (+)
Gene ID: C162_contig_4756_809
Type: STP
Location: 958209 - 959678 (+)
Gene ID: C162_contig_4756_810
Type: TC
Location: 959692 - 961047 (+)
Gene ID: C162_contig_4756_811
Type: TC
Location: 961047 - 961904 (+)
Gene ID: C162_contig_4756_812
Type: CAZyme
Location: 961907 - 964156 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C162_contig_4756_805 vegan > omnivore 1.34503 0.01587
C162_contig_4756_805 vegetarian > omnivore 1.76117 0.00782

🧭 Explore Read Mapping of CGC

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