Cluster: C162.bin_25_CGC1
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: C162.bin_25
- CGC Family ID: CGCFAM_00672
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C162_contig_2232 | C162_contig_2232_12 | 11552 | 13099 | + | GT2 |
| TC | C162_contig_2232 | C162_contig_2232_13 | 13184 | 13942 | + | 3.A.1.103.4 |
| TC | C162_contig_2232 | C162_contig_2232_14 | 13944 | 14723 | + | 3.A.1.103.4 |
| CAZyme | C162_contig_2232 | C162_contig_2232_15 | 14725 | 16740 | + | GT2 | GT4 |
| NULL(UNKNOWN) | C162_contig_2232 | C162_contig_2232_16 | 16757 | 18349 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C162_contig_2232 | C162_contig_2232_17 | 18315 | 19064 | + | GT2 |
| pfam | C162_contig_2232 | C162_contig_2232_18 | 19064 | 19405 | + | DUF2304 |
| pfam | C162_contig_2232 | C162_contig_2232_19 | 19407 | 19760 | + | EamA |
| CAZyme | C162_contig_2232 | C162_contig_2232_20 | 19779 | 20546 | + | GT2 |
| CAZyme | C162_contig_2232 | C162_contig_2232_21 | 20561 | 21607 | + | GT2 |
| CAZyme | C162_contig_2232 | C162_contig_2232_22 | 21678 | 22637 | + | GT2 |
Gene ID: C162_contig_2232_12
Type: CAZyme
Location: 11552 - 13099 (+)
Type: CAZyme
Location: 11552 - 13099 (+)
Gene ID: C162_contig_2232_13
Type: TC
Location: 13184 - 13942 (+)
Type: TC
Location: 13184 - 13942 (+)
Gene ID: C162_contig_2232_14
Type: TC
Location: 13944 - 14723 (+)
Type: TC
Location: 13944 - 14723 (+)
Gene ID: C162_contig_2232_15
Type: CAZyme
Location: 14725 - 16740 (+)
Type: CAZyme
Location: 14725 - 16740 (+)
Gene ID: C162_contig_2232_16
Type:
Location: 16757 - 18349 (+)
Type:
Location: 16757 - 18349 (+)
Gene ID: C162_contig_2232_17
Type: CAZyme
Location: 18315 - 19064 (+)
Type: CAZyme
Location: 18315 - 19064 (+)
Gene ID: C162_contig_2232_18
Type: pfam
Location: 19064 - 19405 (+)
Type: pfam
Location: 19064 - 19405 (+)
Gene ID: C162_contig_2232_19
Type: pfam
Location: 19407 - 19760 (+)
Type: pfam
Location: 19407 - 19760 (+)
Gene ID: C162_contig_2232_20
Type: CAZyme
Location: 19779 - 20546 (+)
Type: CAZyme
Location: 19779 - 20546 (+)
Gene ID: C162_contig_2232_21
Type: CAZyme
Location: 20561 - 21607 (+)
Type: CAZyme
Location: 20561 - 21607 (+)
Gene ID: C162_contig_2232_22
Type: CAZyme
Location: 21678 - 22637 (+)
Type: CAZyme
Location: 21678 - 22637 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
Scybalousia
Species
Scybalousia sp900542735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.