Cluster: C162.bin_13_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: C162.bin_13
- CGC Family ID: CGCFAM_02445
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C162_contig_15 | C162_contig_15_2136 | 2340418 | 2342943 | - | 3.A.3.2.21 |
| pfam | C162_contig_15 | C162_contig_15_2137 | 2343041 | 2343568 | + | Mntp |
| TC | C162_contig_15 | C162_contig_15_2138 | 2343668 | 2345347 | + | 9.B.10.1.1 |
| pfam | C162_contig_15 | C162_contig_15_2139 | 2345381 | 2347789 | + | tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1_2 |
| CAZyme | C162_contig_15 | C162_contig_15_2140 | 2347789 | 2350080 | + | GT2 |
| CAZyme | C162_contig_15 | C162_contig_15_2141 | 2350174 | 2352333 | + | GT2 |
Gene ID: C162_contig_15_2136
Type: TC
Location: 2340418 - 2342943 (-)
Type: TC
Location: 2340418 - 2342943 (-)
Gene ID: C162_contig_15_2137
Type: pfam
Location: 2343041 - 2343568 (+)
Type: pfam
Location: 2343041 - 2343568 (+)
Gene ID: C162_contig_15_2138
Type: TC
Location: 2343668 - 2345347 (+)
Type: TC
Location: 2343668 - 2345347 (+)
Gene ID: C162_contig_15_2139
Type: pfam
Location: 2345381 - 2347789 (+)
Type: pfam
Location: 2345381 - 2347789 (+)
Gene ID: C162_contig_15_2140
Type: CAZyme
Location: 2347789 - 2350080 (+)
Type: CAZyme
Location: 2347789 - 2350080 (+)
Gene ID: C162_contig_15_2141
Type: CAZyme
Location: 2350174 - 2352333 (+)
Type: CAZyme
Location: 2350174 - 2352333 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp000433735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.